Gene : Lsat_1_v5_gn_2_79701 L. sativa V8
Defline:  (1 of 6) PF05512 - AWPM-19-like family (AWPM-19) Genomic Order:  2165
Name:  ? Lsat_1_v5_gn_2_79701 Secondary Identifier:  ? PAC:38958824
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_79701 0.5kb upstream 0.5kb upstream 2324   true Lsat_1_v8_lg_2: 154776592-154778915 Lactuca sativa
Lsat_1_v5_gn_2_79701 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 154776592-154777091 Lactuca sativa
Lsat_1_v5_gn_2_79701 0.5kb downstream 0.5kb downstream 2324   true Lsat_1_v8_lg_2: 154777092-154779415 Lactuca sativa
Lsat_1_v5_gn_2_79701 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 154778916-154779415 Lactuca sativa
Lsat_1_v5_gn_2_79701 1.0kb upstream 1.0kb upstream 2824   true Lsat_1_v8_lg_2: 154776092-154778915 Lactuca sativa
Lsat_1_v5_gn_2_79701 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 154776092-154777091 Lactuca sativa
Lsat_1_v5_gn_2_79701 1.0kb downstream 1.0kb downstream 2824   true Lsat_1_v8_lg_2: 154777092-154779915 Lactuca sativa
Lsat_1_v5_gn_2_79701 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 154778916-154779915 Lactuca sativa
Lsat_1_v5_gn_2_79701 2.0kb upstream 2.0kb upstream 3824   true Lsat_1_v8_lg_2: 154775092-154778915 Lactuca sativa
Lsat_1_v5_gn_2_79701 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 154775092-154777091 Lactuca sativa
Lsat_1_v5_gn_2_79701 2.0kb downstream 2.0kb downstream 3824   true Lsat_1_v8_lg_2: 154777092-154780915 Lactuca sativa
Lsat_1_v5_gn_2_79701 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 154778916-154780915 Lactuca sativa
Lsat_1_v5_gn_2_79701 5.0kb upstream 5.0kb upstream 6824   true Lsat_1_v8_lg_2: 154772092-154778915 Lactuca sativa
Lsat_1_v5_gn_2_79701 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 154772092-154777091 Lactuca sativa
Lsat_1_v5_gn_2_79701 5.0kb downstream 5.0kb downstream 6824   true Lsat_1_v8_lg_2: 154777092-154783915 Lactuca sativa
Lsat_1_v5_gn_2_79701 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 154778916-154783915 Lactuca sativa
Lsat_1_v5_gn_2_79701 10.0kb upstream 10.0kb upstream 11824   true Lsat_1_v8_lg_2: 154767092-154778915 Lactuca sativa
Lsat_1_v5_gn_2_79701 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 154767092-154777091 Lactuca sativa
Lsat_1_v5_gn_2_79701 10.0kb downstream 10.0kb downstream 11824   true Lsat_1_v8_lg_2: 154777092-154788915 Lactuca sativa
Lsat_1_v5_gn_2_79701 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 154778916-154788915 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028934 5273 Angiosperm View MSA
121467842 5263 Asterids View MSA
123746246 5271 Pentapetalae View MSA
122795629 5272 Eudicot View MSA
121351224 5274 Embryophyte View MSA
123382062 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain