Gene : Lsat_1_v5_gn_2_80401 L. sativa V8
Defline:  (1 of 1) K10606 - E3 ubiquitin-protein ligase FANCL (FANCL, PHF9) Genomic Order:  2258
Name:  ? Lsat_1_v5_gn_2_80401 Secondary Identifier:  ? PAC:38962632
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_80401 0.5kb upstream 0.5kb upstream 2536   true Lsat_1_v8_lg_2: 157325582-157328117 Lactuca sativa
Lsat_1_v5_gn_2_80401 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 157327618-157328117 Lactuca sativa
Lsat_1_v5_gn_2_80401 0.5kb downstream 0.5kb downstream 2536   true Lsat_1_v8_lg_2: 157325082-157327617 Lactuca sativa
Lsat_1_v5_gn_2_80401 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 157325082-157325581 Lactuca sativa
Lsat_1_v5_gn_2_80401 1.0kb upstream 1.0kb upstream 3036   true Lsat_1_v8_lg_2: 157325582-157328617 Lactuca sativa
Lsat_1_v5_gn_2_80401 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 157327618-157328617 Lactuca sativa
Lsat_1_v5_gn_2_80401 1.0kb downstream 1.0kb downstream 3036   true Lsat_1_v8_lg_2: 157324582-157327617 Lactuca sativa
Lsat_1_v5_gn_2_80401 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 157324582-157325581 Lactuca sativa
Lsat_1_v5_gn_2_80401 2.0kb upstream 2.0kb upstream 4036   true Lsat_1_v8_lg_2: 157325582-157329617 Lactuca sativa
Lsat_1_v5_gn_2_80401 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 157327618-157329617 Lactuca sativa
Lsat_1_v5_gn_2_80401 2.0kb downstream 2.0kb downstream 4036   true Lsat_1_v8_lg_2: 157323582-157327617 Lactuca sativa
Lsat_1_v5_gn_2_80401 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 157323582-157325581 Lactuca sativa
Lsat_1_v5_gn_2_80401 5.0kb upstream 5.0kb upstream 7036   true Lsat_1_v8_lg_2: 157325582-157332617 Lactuca sativa
Lsat_1_v5_gn_2_80401 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 157327618-157332617 Lactuca sativa
Lsat_1_v5_gn_2_80401 5.0kb downstream 5.0kb downstream 7036   true Lsat_1_v8_lg_2: 157320582-157327617 Lactuca sativa
Lsat_1_v5_gn_2_80401 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 157320582-157325581 Lactuca sativa
Lsat_1_v5_gn_2_80401 10.0kb upstream 10.0kb upstream 12036   true Lsat_1_v8_lg_2: 157325582-157337617 Lactuca sativa
Lsat_1_v5_gn_2_80401 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 157327618-157337617 Lactuca sativa
Lsat_1_v5_gn_2_80401 10.0kb downstream 10.0kb downstream 12036   true Lsat_1_v8_lg_2: 157315582-157327617 Lactuca sativa
Lsat_1_v5_gn_2_80401 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 157315582-157325581 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040943 5273 Angiosperm View MSA
121471585 5263 Asterids View MSA
123739121 5271 Pentapetalae View MSA
122791558 5272 Eudicot View MSA
121344260 5274 Embryophyte View MSA
123423854 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain