Gene : Lsat_1_v5_gn_3_121961 L. sativa V8
Defline:  (1 of 219) PF00847 - AP2 domain (AP2) Genomic Order:  3501
Name:  ? Lsat_1_v5_gn_3_121961 Secondary Identifier:  ? PAC:38916105
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_121961 0.5kb upstream 0.5kb upstream 1172   true Lsat_1_v8_lg_3: 204335880-204337051 Lactuca sativa
Lsat_1_v5_gn_3_121961 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 204336552-204337051 Lactuca sativa
Lsat_1_v5_gn_3_121961 0.5kb downstream 0.5kb downstream 1172   true Lsat_1_v8_lg_3: 204335380-204336551 Lactuca sativa
Lsat_1_v5_gn_3_121961 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 204335380-204335879 Lactuca sativa
Lsat_1_v5_gn_3_121961 1.0kb upstream 1.0kb upstream 1672   true Lsat_1_v8_lg_3: 204335880-204337551 Lactuca sativa
Lsat_1_v5_gn_3_121961 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 204336552-204337551 Lactuca sativa
Lsat_1_v5_gn_3_121961 1.0kb downstream 1.0kb downstream 1672   true Lsat_1_v8_lg_3: 204334880-204336551 Lactuca sativa
Lsat_1_v5_gn_3_121961 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 204334880-204335879 Lactuca sativa
Lsat_1_v5_gn_3_121961 2.0kb upstream 2.0kb upstream 2672   true Lsat_1_v8_lg_3: 204335880-204338551 Lactuca sativa
Lsat_1_v5_gn_3_121961 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 204336552-204338551 Lactuca sativa
Lsat_1_v5_gn_3_121961 2.0kb downstream 2.0kb downstream 2672   true Lsat_1_v8_lg_3: 204333880-204336551 Lactuca sativa
Lsat_1_v5_gn_3_121961 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 204333880-204335879 Lactuca sativa
Lsat_1_v5_gn_3_121961 5.0kb upstream 5.0kb upstream 5672   true Lsat_1_v8_lg_3: 204335880-204341551 Lactuca sativa
Lsat_1_v5_gn_3_121961 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 204336552-204341551 Lactuca sativa
Lsat_1_v5_gn_3_121961 5.0kb downstream 5.0kb downstream 5672   true Lsat_1_v8_lg_3: 204330880-204336551 Lactuca sativa
Lsat_1_v5_gn_3_121961 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 204330880-204335879 Lactuca sativa
Lsat_1_v5_gn_3_121961 10.0kb upstream 10.0kb upstream 10672   true Lsat_1_v8_lg_3: 204335880-204346551 Lactuca sativa
Lsat_1_v5_gn_3_121961 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 204336552-204346551 Lactuca sativa
Lsat_1_v5_gn_3_121961 10.0kb downstream 10.0kb downstream 10672   true Lsat_1_v8_lg_3: 204325880-204336551 Lactuca sativa
Lsat_1_v5_gn_3_121961 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 204325880-204335879 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468870 5263 Asterids View MSA
123751069 5271 Pentapetalae View MSA
122793913 5272 Eudicot View MSA
122046946 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain