Gene : Lsat_1_v5_gn_3_124521 L. sativa V8
Defline:  (1 of 3) 1.1.2.6 - Polyvinyl alcohol dehydrogenase (cytochrome) / PVADH Genomic Order:  3582
Name:  ? Lsat_1_v5_gn_3_124521 Secondary Identifier:  ? PAC:38921449
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6464 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_124521 0.5kb upstream 0.5kb upstream 4052   true Lsat_1_v8_lg_3: 211643527-211647578 Lactuca sativa
Lsat_1_v5_gn_3_124521 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 211643527-211644026 Lactuca sativa
Lsat_1_v5_gn_3_124521 0.5kb downstream 0.5kb downstream 4052   true Lsat_1_v8_lg_3: 211644027-211648078 Lactuca sativa
Lsat_1_v5_gn_3_124521 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 211647579-211648078 Lactuca sativa
Lsat_1_v5_gn_3_124521 1.0kb upstream 1.0kb upstream 4552   true Lsat_1_v8_lg_3: 211643027-211647578 Lactuca sativa
Lsat_1_v5_gn_3_124521 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 211643027-211644026 Lactuca sativa
Lsat_1_v5_gn_3_124521 1.0kb downstream 1.0kb downstream 4552   true Lsat_1_v8_lg_3: 211644027-211648578 Lactuca sativa
Lsat_1_v5_gn_3_124521 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 211647579-211648578 Lactuca sativa
Lsat_1_v5_gn_3_124521 2.0kb upstream 2.0kb upstream 5552   true Lsat_1_v8_lg_3: 211642027-211647578 Lactuca sativa
Lsat_1_v5_gn_3_124521 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 211642027-211644026 Lactuca sativa
Lsat_1_v5_gn_3_124521 2.0kb downstream 2.0kb downstream 5552   true Lsat_1_v8_lg_3: 211644027-211649578 Lactuca sativa
Lsat_1_v5_gn_3_124521 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 211647579-211649578 Lactuca sativa
Lsat_1_v5_gn_3_124521 5.0kb upstream 5.0kb upstream 8552   true Lsat_1_v8_lg_3: 211639027-211647578 Lactuca sativa
Lsat_1_v5_gn_3_124521 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 211639027-211644026 Lactuca sativa
Lsat_1_v5_gn_3_124521 5.0kb downstream 5.0kb downstream 8552   true Lsat_1_v8_lg_3: 211644027-211652578 Lactuca sativa
Lsat_1_v5_gn_3_124521 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 211647579-211652578 Lactuca sativa
Lsat_1_v5_gn_3_124521 10.0kb upstream 10.0kb upstream 13552   true Lsat_1_v8_lg_3: 211634027-211647578 Lactuca sativa
Lsat_1_v5_gn_3_124521 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 211634027-211644026 Lactuca sativa
Lsat_1_v5_gn_3_124521 10.0kb downstream 10.0kb downstream 13552   true Lsat_1_v8_lg_3: 211644027-211657578 Lactuca sativa
Lsat_1_v5_gn_3_124521 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 211647579-211657578 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792221 5273 Angiosperm View MSA
121478853 5263 Asterids View MSA
123753626 5271 Pentapetalae View MSA
122797018 5272 Eudicot View MSA
121349158 5274 Embryophyte View MSA
123425868 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain