Gene : Lsat_1_v5_gn_3_12541 L. sativa V8
Defline:  (1 of 3) PTHR24320:SF81 - NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN Genomic Order:  376
Name:  ? Lsat_1_v5_gn_3_12541 Secondary Identifier:  ? PAC:38920954
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5080 Lactuca sativa pathologic  
Lsativa PWY-6433 Lactuca sativa pathologic  
Lsativa PWY-6598 Lactuca sativa pathologic  
Lsativa PWY-7036 Lactuca sativa pathologic  
Lsativa PWY-7601 Lactuca sativa pathologic  
Lsativa PWY-7606 Lactuca sativa pathologic  
Lsativa PWY-7619 Lactuca sativa pathologic  
Lsativa PWY-7726 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_12541 0.5kb upstream 0.5kb upstream 3588   true Lsat_1_v8_lg_3: 17556660-17560247 Lactuca sativa
Lsat_1_v5_gn_3_12541 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 17559748-17560247 Lactuca sativa
Lsat_1_v5_gn_3_12541 0.5kb downstream 0.5kb downstream 3588   true Lsat_1_v8_lg_3: 17556160-17559747 Lactuca sativa
Lsat_1_v5_gn_3_12541 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 17556160-17556659 Lactuca sativa
Lsat_1_v5_gn_3_12541 1.0kb upstream 1.0kb upstream 4088   true Lsat_1_v8_lg_3: 17556660-17560747 Lactuca sativa
Lsat_1_v5_gn_3_12541 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 17559748-17560747 Lactuca sativa
Lsat_1_v5_gn_3_12541 1.0kb downstream 1.0kb downstream 4088   true Lsat_1_v8_lg_3: 17555660-17559747 Lactuca sativa
Lsat_1_v5_gn_3_12541 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 17555660-17556659 Lactuca sativa
Lsat_1_v5_gn_3_12541 2.0kb upstream 2.0kb upstream 5088   true Lsat_1_v8_lg_3: 17556660-17561747 Lactuca sativa
Lsat_1_v5_gn_3_12541 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 17559748-17561747 Lactuca sativa
Lsat_1_v5_gn_3_12541 2.0kb downstream 2.0kb downstream 5088   true Lsat_1_v8_lg_3: 17554660-17559747 Lactuca sativa
Lsat_1_v5_gn_3_12541 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 17554660-17556659 Lactuca sativa
Lsat_1_v5_gn_3_12541 5.0kb upstream 5.0kb upstream 8088   true Lsat_1_v8_lg_3: 17556660-17564747 Lactuca sativa
Lsat_1_v5_gn_3_12541 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 17559748-17564747 Lactuca sativa
Lsat_1_v5_gn_3_12541 5.0kb downstream 5.0kb downstream 8088   true Lsat_1_v8_lg_3: 17551660-17559747 Lactuca sativa
Lsat_1_v5_gn_3_12541 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 17551660-17556659 Lactuca sativa
Lsat_1_v5_gn_3_12541 10.0kb upstream 10.0kb upstream 13088   true Lsat_1_v8_lg_3: 17556660-17569747 Lactuca sativa
Lsat_1_v5_gn_3_12541 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 17559748-17569747 Lactuca sativa
Lsat_1_v5_gn_3_12541 10.0kb downstream 10.0kb downstream 13088   true Lsat_1_v8_lg_3: 17546660-17559747 Lactuca sativa
Lsat_1_v5_gn_3_12541 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 17546660-17556659 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468232 5263 Asterids View MSA
123748222 5271 Pentapetalae View MSA
122791210 5272 Eudicot View MSA
122047587 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121310767 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain