Gene : Lsat_1_v5_gn_3_12621 L. sativa V8
Defline:  (1 of 1) K01194 - alpha,alpha-trehalase (E3.2.1.28, treA, treF) Genomic Order:  379
Name:  ? Lsat_1_v5_gn_3_12621 Secondary Identifier:  ? PAC:38916762
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_12621 0.5kb upstream 0.5kb upstream 3576   true Lsat_1_v8_lg_3: 17620868-17624443 Lactuca sativa
Lsat_1_v5_gn_3_12621 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 17623944-17624443 Lactuca sativa
Lsat_1_v5_gn_3_12621 0.5kb downstream 0.5kb downstream 3576   true Lsat_1_v8_lg_3: 17620368-17623943 Lactuca sativa
Lsat_1_v5_gn_3_12621 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 17620368-17620867 Lactuca sativa
Lsat_1_v5_gn_3_12621 1.0kb upstream 1.0kb upstream 4076   true Lsat_1_v8_lg_3: 17620868-17624943 Lactuca sativa
Lsat_1_v5_gn_3_12621 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 17623944-17624943 Lactuca sativa
Lsat_1_v5_gn_3_12621 1.0kb downstream 1.0kb downstream 4076   true Lsat_1_v8_lg_3: 17619868-17623943 Lactuca sativa
Lsat_1_v5_gn_3_12621 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 17619868-17620867 Lactuca sativa
Lsat_1_v5_gn_3_12621 2.0kb upstream 2.0kb upstream 5076   true Lsat_1_v8_lg_3: 17620868-17625943 Lactuca sativa
Lsat_1_v5_gn_3_12621 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 17623944-17625943 Lactuca sativa
Lsat_1_v5_gn_3_12621 2.0kb downstream 2.0kb downstream 5076   true Lsat_1_v8_lg_3: 17618868-17623943 Lactuca sativa
Lsat_1_v5_gn_3_12621 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 17618868-17620867 Lactuca sativa
Lsat_1_v5_gn_3_12621 5.0kb upstream 5.0kb upstream 8076   true Lsat_1_v8_lg_3: 17620868-17628943 Lactuca sativa
Lsat_1_v5_gn_3_12621 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 17623944-17628943 Lactuca sativa
Lsat_1_v5_gn_3_12621 5.0kb downstream 5.0kb downstream 8076   true Lsat_1_v8_lg_3: 17615868-17623943 Lactuca sativa
Lsat_1_v5_gn_3_12621 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 17615868-17620867 Lactuca sativa
Lsat_1_v5_gn_3_12621 10.0kb upstream 10.0kb upstream 13076   true Lsat_1_v8_lg_3: 17620868-17633943 Lactuca sativa
Lsat_1_v5_gn_3_12621 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 17623944-17633943 Lactuca sativa
Lsat_1_v5_gn_3_12621 10.0kb downstream 10.0kb downstream 13076   true Lsat_1_v8_lg_3: 17610868-17623943 Lactuca sativa
Lsat_1_v5_gn_3_12621 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 17610868-17620867 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473515 5263 Asterids View MSA
123743670 5271 Pentapetalae View MSA
122788986 5272 Eudicot View MSA
122046703 5273 Angiosperm View MSA
121347864 5274 Embryophyte View MSA
123424777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain