Gene : Lsat_1_v5_gn_3_128920 L. sativa V8
Defline:  (1 of 14) PF04640 - PLATZ transcription factor (PLATZ) Genomic Order:  3700
Name:  ? Lsat_1_v5_gn_3_128920 Secondary Identifier:  ? PAC:38919280
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_128920 0.5kb upstream 0.5kb upstream 2124   true Lsat_1_v8_lg_3: 226551867-226553990 Lactuca sativa
Lsat_1_v5_gn_3_128920 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 226553491-226553990 Lactuca sativa
Lsat_1_v5_gn_3_128920 0.5kb downstream 0.5kb downstream 2124   true Lsat_1_v8_lg_3: 226551367-226553490 Lactuca sativa
Lsat_1_v5_gn_3_128920 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 226551367-226551866 Lactuca sativa
Lsat_1_v5_gn_3_128920 1.0kb upstream 1.0kb upstream 2624   true Lsat_1_v8_lg_3: 226551867-226554490 Lactuca sativa
Lsat_1_v5_gn_3_128920 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 226553491-226554490 Lactuca sativa
Lsat_1_v5_gn_3_128920 1.0kb downstream 1.0kb downstream 2624   true Lsat_1_v8_lg_3: 226550867-226553490 Lactuca sativa
Lsat_1_v5_gn_3_128920 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 226550867-226551866 Lactuca sativa
Lsat_1_v5_gn_3_128920 2.0kb upstream 2.0kb upstream 3624   true Lsat_1_v8_lg_3: 226551867-226555490 Lactuca sativa
Lsat_1_v5_gn_3_128920 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 226553491-226555490 Lactuca sativa
Lsat_1_v5_gn_3_128920 2.0kb downstream 2.0kb downstream 3624   true Lsat_1_v8_lg_3: 226549867-226553490 Lactuca sativa
Lsat_1_v5_gn_3_128920 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 226549867-226551866 Lactuca sativa
Lsat_1_v5_gn_3_128920 5.0kb upstream 5.0kb upstream 6624   true Lsat_1_v8_lg_3: 226551867-226558490 Lactuca sativa
Lsat_1_v5_gn_3_128920 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 226553491-226558490 Lactuca sativa
Lsat_1_v5_gn_3_128920 5.0kb downstream 5.0kb downstream 6624   true Lsat_1_v8_lg_3: 226546867-226553490 Lactuca sativa
Lsat_1_v5_gn_3_128920 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 226546867-226551866 Lactuca sativa
Lsat_1_v5_gn_3_128920 10.0kb upstream 10.0kb upstream 11624   true Lsat_1_v8_lg_3: 226551867-226563490 Lactuca sativa
Lsat_1_v5_gn_3_128920 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 226553491-226563490 Lactuca sativa
Lsat_1_v5_gn_3_128920 10.0kb downstream 10.0kb downstream 11624   true Lsat_1_v8_lg_3: 226541867-226553490 Lactuca sativa
Lsat_1_v5_gn_3_128920 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 226541867-226551866 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475811 5263 Asterids View MSA
123750215 5271 Pentapetalae View MSA
122789413 5272 Eudicot View MSA
122043598 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain