Gene : Lsat_1_v5_gn_3_129500 L. sativa V8
Defline:  (1 of 2) PTHR11941:SF48 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 1, MITOCHONDRIAL Genomic Order:  3693
Name:  ? Lsat_1_v5_gn_3_129500 Secondary Identifier:  ? PAC:38919110
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7574 Lactuca sativa pathologic  
Lsativa VALDEG-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_129500 0.5kb upstream 0.5kb upstream 6288   true Lsat_1_v8_lg_3: 225122413-225128700 Lactuca sativa
Lsat_1_v5_gn_3_129500 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 225122413-225122912 Lactuca sativa
Lsat_1_v5_gn_3_129500 0.5kb downstream 0.5kb downstream 6288   true Lsat_1_v8_lg_3: 225122913-225129200 Lactuca sativa
Lsat_1_v5_gn_3_129500 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 225128701-225129200 Lactuca sativa
Lsat_1_v5_gn_3_129500 1.0kb upstream 1.0kb upstream 6788   true Lsat_1_v8_lg_3: 225121913-225128700 Lactuca sativa
Lsat_1_v5_gn_3_129500 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 225121913-225122912 Lactuca sativa
Lsat_1_v5_gn_3_129500 1.0kb downstream 1.0kb downstream 6788   true Lsat_1_v8_lg_3: 225122913-225129700 Lactuca sativa
Lsat_1_v5_gn_3_129500 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 225128701-225129700 Lactuca sativa
Lsat_1_v5_gn_3_129500 2.0kb upstream 2.0kb upstream 7788   true Lsat_1_v8_lg_3: 225120913-225128700 Lactuca sativa
Lsat_1_v5_gn_3_129500 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 225120913-225122912 Lactuca sativa
Lsat_1_v5_gn_3_129500 2.0kb downstream 2.0kb downstream 7788   true Lsat_1_v8_lg_3: 225122913-225130700 Lactuca sativa
Lsat_1_v5_gn_3_129500 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 225128701-225130700 Lactuca sativa
Lsat_1_v5_gn_3_129500 5.0kb upstream 5.0kb upstream 10788   true Lsat_1_v8_lg_3: 225117913-225128700 Lactuca sativa
Lsat_1_v5_gn_3_129500 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 225117913-225122912 Lactuca sativa
Lsat_1_v5_gn_3_129500 5.0kb downstream 5.0kb downstream 10788   true Lsat_1_v8_lg_3: 225122913-225133700 Lactuca sativa
Lsat_1_v5_gn_3_129500 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 225128701-225133700 Lactuca sativa
Lsat_1_v5_gn_3_129500 10.0kb upstream 10.0kb upstream 15788   true Lsat_1_v8_lg_3: 225112913-225128700 Lactuca sativa
Lsat_1_v5_gn_3_129500 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 225112913-225122912 Lactuca sativa
Lsat_1_v5_gn_3_129500 10.0kb downstream 10.0kb downstream 15788   true Lsat_1_v8_lg_3: 225122913-225138700 Lactuca sativa
Lsat_1_v5_gn_3_129500 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 225128701-225138700 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474030 5263 Asterids View MSA
123742938 5271 Pentapetalae View MSA
122794700 5272 Eudicot View MSA
122041951 5273 Angiosperm View MSA
121350478 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain