Gene : Lsat_1_v5_gn_3_131620 L. sativa V8
Defline:  (1 of 4) PTHR24093//PTHR24093:SF264 - FAMILY NOT NAMED // ATPASE 4, PLASMA MEMBRANE-TYPE Genomic Order:  3666
Name:  ? Lsat_1_v5_gn_3_131620 Secondary Identifier:  ? PAC:38917114
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_131620 0.5kb upstream 0.5kb upstream 9996   true Lsat_1_v8_lg_3: 220356046-220366041 Lactuca sativa
Lsat_1_v5_gn_3_131620 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 220356046-220356545 Lactuca sativa
Lsat_1_v5_gn_3_131620 0.5kb downstream 0.5kb downstream 9996   true Lsat_1_v8_lg_3: 220356546-220366541 Lactuca sativa
Lsat_1_v5_gn_3_131620 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 220366042-220366541 Lactuca sativa
Lsat_1_v5_gn_3_131620 1.0kb upstream 1.0kb upstream 10496   true Lsat_1_v8_lg_3: 220355546-220366041 Lactuca sativa
Lsat_1_v5_gn_3_131620 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 220355546-220356545 Lactuca sativa
Lsat_1_v5_gn_3_131620 1.0kb downstream 1.0kb downstream 10496   true Lsat_1_v8_lg_3: 220356546-220367041 Lactuca sativa
Lsat_1_v5_gn_3_131620 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 220366042-220367041 Lactuca sativa
Lsat_1_v5_gn_3_131620 2.0kb upstream 2.0kb upstream 11496   true Lsat_1_v8_lg_3: 220354546-220366041 Lactuca sativa
Lsat_1_v5_gn_3_131620 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 220354546-220356545 Lactuca sativa
Lsat_1_v5_gn_3_131620 2.0kb downstream 2.0kb downstream 11496   true Lsat_1_v8_lg_3: 220356546-220368041 Lactuca sativa
Lsat_1_v5_gn_3_131620 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 220366042-220368041 Lactuca sativa
Lsat_1_v5_gn_3_131620 5.0kb upstream 5.0kb upstream 14496   true Lsat_1_v8_lg_3: 220351546-220366041 Lactuca sativa
Lsat_1_v5_gn_3_131620 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 220351546-220356545 Lactuca sativa
Lsat_1_v5_gn_3_131620 5.0kb downstream 5.0kb downstream 14496   true Lsat_1_v8_lg_3: 220356546-220371041 Lactuca sativa
Lsat_1_v5_gn_3_131620 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 220366042-220371041 Lactuca sativa
Lsat_1_v5_gn_3_131620 10.0kb upstream 10.0kb upstream 19496   true Lsat_1_v8_lg_3: 220346546-220366041 Lactuca sativa
Lsat_1_v5_gn_3_131620 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 220346546-220356545 Lactuca sativa
Lsat_1_v5_gn_3_131620 10.0kb downstream 10.0kb downstream 19496   true Lsat_1_v8_lg_3: 220356546-220376041 Lactuca sativa
Lsat_1_v5_gn_3_131620 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 220366042-220376041 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476492 5263 Asterids View MSA
123745200 5271 Pentapetalae View MSA
122795263 5272 Eudicot View MSA
122049671 5273 Angiosperm View MSA
121311532 5274 Embryophyte View MSA
123428375 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain