Gene : Lsat_1_v5_gn_3_131600 L. sativa V8
Defline:  (1 of 1) PTHR31296:SF1 - UPF0565 PROTEIN C2ORF69 Genomic Order:  3665
Name:  ? Lsat_1_v5_gn_3_131600 Secondary Identifier:  ? PAC:38917573
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_131600 0.5kb upstream 0.5kb upstream 4805   true Lsat_1_v8_lg_3: 220348532-220353336 Lactuca sativa
Lsat_1_v5_gn_3_131600 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 220348532-220349031 Lactuca sativa
Lsat_1_v5_gn_3_131600 0.5kb downstream 0.5kb downstream 4805   true Lsat_1_v8_lg_3: 220349032-220353836 Lactuca sativa
Lsat_1_v5_gn_3_131600 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 220353337-220353836 Lactuca sativa
Lsat_1_v5_gn_3_131600 1.0kb upstream 1.0kb upstream 5305   true Lsat_1_v8_lg_3: 220348032-220353336 Lactuca sativa
Lsat_1_v5_gn_3_131600 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 220348032-220349031 Lactuca sativa
Lsat_1_v5_gn_3_131600 1.0kb downstream 1.0kb downstream 5305   true Lsat_1_v8_lg_3: 220349032-220354336 Lactuca sativa
Lsat_1_v5_gn_3_131600 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 220353337-220354336 Lactuca sativa
Lsat_1_v5_gn_3_131600 2.0kb upstream 2.0kb upstream 6305   true Lsat_1_v8_lg_3: 220347032-220353336 Lactuca sativa
Lsat_1_v5_gn_3_131600 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 220347032-220349031 Lactuca sativa
Lsat_1_v5_gn_3_131600 2.0kb downstream 2.0kb downstream 6305   true Lsat_1_v8_lg_3: 220349032-220355336 Lactuca sativa
Lsat_1_v5_gn_3_131600 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 220353337-220355336 Lactuca sativa
Lsat_1_v5_gn_3_131600 5.0kb upstream 5.0kb upstream 9305   true Lsat_1_v8_lg_3: 220344032-220353336 Lactuca sativa
Lsat_1_v5_gn_3_131600 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 220344032-220349031 Lactuca sativa
Lsat_1_v5_gn_3_131600 5.0kb downstream 5.0kb downstream 9305   true Lsat_1_v8_lg_3: 220349032-220358336 Lactuca sativa
Lsat_1_v5_gn_3_131600 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 220353337-220358336 Lactuca sativa
Lsat_1_v5_gn_3_131600 10.0kb upstream 10.0kb upstream 14305   true Lsat_1_v8_lg_3: 220339032-220353336 Lactuca sativa
Lsat_1_v5_gn_3_131600 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 220339032-220349031 Lactuca sativa
Lsat_1_v5_gn_3_131600 10.0kb downstream 10.0kb downstream 14305   true Lsat_1_v8_lg_3: 220349032-220363336 Lactuca sativa
Lsat_1_v5_gn_3_131600 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 220353337-220363336 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474654 5263 Asterids View MSA
123739442 5271 Pentapetalae View MSA
122787900 5272 Eudicot View MSA
122048933 5273 Angiosperm View MSA
121346083 5274 Embryophyte View MSA
123425579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain