Gene : Lsat_1_v5_gn_3_132060 L. sativa V8
Defline:  (1 of 2) PTHR22883//PTHR22883:SF66 - ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN // PROTEIN S-ACYLTRANSFERASE 13-RELATED Genomic Order:  3756
Name:  ? Lsat_1_v5_gn_3_132060 Secondary Identifier:  ? PAC:38915205
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_132060 0.5kb upstream 0.5kb upstream 3989   true Lsat_1_v8_lg_3: 236172349-236176337 Lactuca sativa
Lsat_1_v5_gn_3_132060 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 236175838-236176337 Lactuca sativa
Lsat_1_v5_gn_3_132060 0.5kb downstream 0.5kb downstream 3989   true Lsat_1_v8_lg_3: 236171849-236175837 Lactuca sativa
Lsat_1_v5_gn_3_132060 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 236171849-236172348 Lactuca sativa
Lsat_1_v5_gn_3_132060 1.0kb upstream 1.0kb upstream 4489   true Lsat_1_v8_lg_3: 236172349-236176837 Lactuca sativa
Lsat_1_v5_gn_3_132060 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 236175838-236176837 Lactuca sativa
Lsat_1_v5_gn_3_132060 1.0kb downstream 1.0kb downstream 4489   true Lsat_1_v8_lg_3: 236171349-236175837 Lactuca sativa
Lsat_1_v5_gn_3_132060 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 236171349-236172348 Lactuca sativa
Lsat_1_v5_gn_3_132060 2.0kb upstream 2.0kb upstream 5489   true Lsat_1_v8_lg_3: 236172349-236177837 Lactuca sativa
Lsat_1_v5_gn_3_132060 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 236175838-236177837 Lactuca sativa
Lsat_1_v5_gn_3_132060 2.0kb downstream 2.0kb downstream 5489   true Lsat_1_v8_lg_3: 236170349-236175837 Lactuca sativa
Lsat_1_v5_gn_3_132060 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 236170349-236172348 Lactuca sativa
Lsat_1_v5_gn_3_132060 5.0kb upstream 5.0kb upstream 8489   true Lsat_1_v8_lg_3: 236172349-236180837 Lactuca sativa
Lsat_1_v5_gn_3_132060 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 236175838-236180837 Lactuca sativa
Lsat_1_v5_gn_3_132060 5.0kb downstream 5.0kb downstream 8489   true Lsat_1_v8_lg_3: 236167349-236175837 Lactuca sativa
Lsat_1_v5_gn_3_132060 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 236167349-236172348 Lactuca sativa
Lsat_1_v5_gn_3_132060 10.0kb upstream 10.0kb upstream 13489   true Lsat_1_v8_lg_3: 236172349-236185837 Lactuca sativa
Lsat_1_v5_gn_3_132060 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 236175838-236185837 Lactuca sativa
Lsat_1_v5_gn_3_132060 10.0kb downstream 10.0kb downstream 13489   true Lsat_1_v8_lg_3: 236162349-236175837 Lactuca sativa
Lsat_1_v5_gn_3_132060 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 236162349-236172348 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474289 5263 Asterids View MSA
123743778 5271 Pentapetalae View MSA
122788301 5272 Eudicot View MSA
122049662 5273 Angiosperm View MSA
121349206 5274 Embryophyte View MSA
123428148 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain