Gene : Lsat_1_v5_gn_3_134681 L. sativa V8
Defline:  (1 of 1) PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED Genomic Order:  3809
Name:  ? Lsat_1_v5_gn_3_134681 Secondary Identifier:  ? PAC:38920495
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_134681 0.5kb upstream 0.5kb upstream 4777   true Lsat_1_v8_lg_3: 243918248-243923024 Lactuca sativa
Lsat_1_v5_gn_3_134681 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 243918248-243918747 Lactuca sativa
Lsat_1_v5_gn_3_134681 0.5kb downstream 0.5kb downstream 4777   true Lsat_1_v8_lg_3: 243918748-243923524 Lactuca sativa
Lsat_1_v5_gn_3_134681 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 243923025-243923524 Lactuca sativa
Lsat_1_v5_gn_3_134681 1.0kb upstream 1.0kb upstream 5277   true Lsat_1_v8_lg_3: 243917748-243923024 Lactuca sativa
Lsat_1_v5_gn_3_134681 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 243917748-243918747 Lactuca sativa
Lsat_1_v5_gn_3_134681 1.0kb downstream 1.0kb downstream 5277   true Lsat_1_v8_lg_3: 243918748-243924024 Lactuca sativa
Lsat_1_v5_gn_3_134681 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 243923025-243924024 Lactuca sativa
Lsat_1_v5_gn_3_134681 2.0kb upstream 2.0kb upstream 6277   true Lsat_1_v8_lg_3: 243916748-243923024 Lactuca sativa
Lsat_1_v5_gn_3_134681 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 243916748-243918747 Lactuca sativa
Lsat_1_v5_gn_3_134681 2.0kb downstream 2.0kb downstream 6277   true Lsat_1_v8_lg_3: 243918748-243925024 Lactuca sativa
Lsat_1_v5_gn_3_134681 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 243923025-243925024 Lactuca sativa
Lsat_1_v5_gn_3_134681 5.0kb upstream 5.0kb upstream 9277   true Lsat_1_v8_lg_3: 243913748-243923024 Lactuca sativa
Lsat_1_v5_gn_3_134681 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 243913748-243918747 Lactuca sativa
Lsat_1_v5_gn_3_134681 5.0kb downstream 5.0kb downstream 9277   true Lsat_1_v8_lg_3: 243918748-243928024 Lactuca sativa
Lsat_1_v5_gn_3_134681 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 243923025-243928024 Lactuca sativa
Lsat_1_v5_gn_3_134681 10.0kb upstream 10.0kb upstream 14277   true Lsat_1_v8_lg_3: 243908748-243923024 Lactuca sativa
Lsat_1_v5_gn_3_134681 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 243908748-243918747 Lactuca sativa
Lsat_1_v5_gn_3_134681 10.0kb downstream 10.0kb downstream 14277   true Lsat_1_v8_lg_3: 243918748-243933024 Lactuca sativa
Lsat_1_v5_gn_3_134681 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 243923025-243933024 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476725 5263 Asterids View MSA
123750627 5271 Pentapetalae View MSA
122793492 5272 Eudicot View MSA
122049609 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain