Gene : Lsat_1_v5_gn_3_138540 L. sativa V8
Defline:  (1 of 2) PTHR12100 - SEC10 Genomic Order:  3902
Name:  ? Lsat_1_v5_gn_3_138540 Secondary Identifier:  ? PAC:38917206
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_138540 0.5kb upstream 0.5kb upstream 7765   true Lsat_1_v8_lg_3: 251180086-251187850 Lactuca sativa
Lsat_1_v5_gn_3_138540 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 251187351-251187850 Lactuca sativa
Lsat_1_v5_gn_3_138540 0.5kb downstream 0.5kb downstream 7765   true Lsat_1_v8_lg_3: 251179586-251187350 Lactuca sativa
Lsat_1_v5_gn_3_138540 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 251179586-251180085 Lactuca sativa
Lsat_1_v5_gn_3_138540 1.0kb upstream 1.0kb upstream 8265   true Lsat_1_v8_lg_3: 251180086-251188350 Lactuca sativa
Lsat_1_v5_gn_3_138540 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 251187351-251188350 Lactuca sativa
Lsat_1_v5_gn_3_138540 1.0kb downstream 1.0kb downstream 8265   true Lsat_1_v8_lg_3: 251179086-251187350 Lactuca sativa
Lsat_1_v5_gn_3_138540 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 251179086-251180085 Lactuca sativa
Lsat_1_v5_gn_3_138540 2.0kb upstream 2.0kb upstream 9265   true Lsat_1_v8_lg_3: 251180086-251189350 Lactuca sativa
Lsat_1_v5_gn_3_138540 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 251187351-251189350 Lactuca sativa
Lsat_1_v5_gn_3_138540 2.0kb downstream 2.0kb downstream 9265   true Lsat_1_v8_lg_3: 251178086-251187350 Lactuca sativa
Lsat_1_v5_gn_3_138540 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 251178086-251180085 Lactuca sativa
Lsat_1_v5_gn_3_138540 5.0kb upstream 5.0kb upstream 12265   true Lsat_1_v8_lg_3: 251180086-251192350 Lactuca sativa
Lsat_1_v5_gn_3_138540 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 251187351-251192350 Lactuca sativa
Lsat_1_v5_gn_3_138540 5.0kb downstream 5.0kb downstream 12265   true Lsat_1_v8_lg_3: 251175086-251187350 Lactuca sativa
Lsat_1_v5_gn_3_138540 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 251175086-251180085 Lactuca sativa
Lsat_1_v5_gn_3_138540 10.0kb upstream 10.0kb upstream 17265   true Lsat_1_v8_lg_3: 251180086-251197350 Lactuca sativa
Lsat_1_v5_gn_3_138540 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 251187351-251197350 Lactuca sativa
Lsat_1_v5_gn_3_138540 10.0kb downstream 10.0kb downstream 17265   true Lsat_1_v8_lg_3: 251170086-251187350 Lactuca sativa
Lsat_1_v5_gn_3_138540 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 251170086-251180085 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471575 5263 Asterids View MSA
123739116 5271 Pentapetalae View MSA
122790579 5272 Eudicot View MSA
122042742 5273 Angiosperm View MSA
121350027 5274 Embryophyte View MSA
123428595 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain