Gene : Lsat_1_v5_gn_3_139641 L. sativa V8
Defline:  (1 of 3) PTHR31373//PTHR31373:SF0 - FAMILY NOT NAMED // EMB|CAB86628.1 Genomic Order:  3930
Name:  ? Lsat_1_v5_gn_3_139641 Secondary Identifier:  ? PAC:38920092
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_139641 0.5kb upstream 0.5kb upstream 2450   true Lsat_1_v8_lg_3: 253394553-253397002 Lactuca sativa
Lsat_1_v5_gn_3_139641 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 253396503-253397002 Lactuca sativa
Lsat_1_v5_gn_3_139641 0.5kb downstream 0.5kb downstream 2450   true Lsat_1_v8_lg_3: 253394053-253396502 Lactuca sativa
Lsat_1_v5_gn_3_139641 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 253394053-253394552 Lactuca sativa
Lsat_1_v5_gn_3_139641 1.0kb upstream 1.0kb upstream 2950   true Lsat_1_v8_lg_3: 253394553-253397502 Lactuca sativa
Lsat_1_v5_gn_3_139641 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 253396503-253397502 Lactuca sativa
Lsat_1_v5_gn_3_139641 1.0kb downstream 1.0kb downstream 2950   true Lsat_1_v8_lg_3: 253393553-253396502 Lactuca sativa
Lsat_1_v5_gn_3_139641 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 253393553-253394552 Lactuca sativa
Lsat_1_v5_gn_3_139641 2.0kb upstream 2.0kb upstream 3950   true Lsat_1_v8_lg_3: 253394553-253398502 Lactuca sativa
Lsat_1_v5_gn_3_139641 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 253396503-253398502 Lactuca sativa
Lsat_1_v5_gn_3_139641 2.0kb downstream 2.0kb downstream 3950   true Lsat_1_v8_lg_3: 253392553-253396502 Lactuca sativa
Lsat_1_v5_gn_3_139641 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 253392553-253394552 Lactuca sativa
Lsat_1_v5_gn_3_139641 5.0kb upstream 5.0kb upstream 6950   true Lsat_1_v8_lg_3: 253394553-253401502 Lactuca sativa
Lsat_1_v5_gn_3_139641 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 253396503-253401502 Lactuca sativa
Lsat_1_v5_gn_3_139641 5.0kb downstream 5.0kb downstream 6950   true Lsat_1_v8_lg_3: 253389553-253396502 Lactuca sativa
Lsat_1_v5_gn_3_139641 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 253389553-253394552 Lactuca sativa
Lsat_1_v5_gn_3_139641 10.0kb upstream 10.0kb upstream 11950   true Lsat_1_v8_lg_3: 253394553-253406502 Lactuca sativa
Lsat_1_v5_gn_3_139641 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 253396503-253406502 Lactuca sativa
Lsat_1_v5_gn_3_139641 10.0kb downstream 10.0kb downstream 11950   true Lsat_1_v8_lg_3: 253384553-253396502 Lactuca sativa
Lsat_1_v5_gn_3_139641 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 253384553-253394552 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041452 5273 Angiosperm View MSA
121475948 5263 Asterids View MSA
123749450 5271 Pentapetalae View MSA
122797220 5272 Eudicot View MSA
121346363 5274 Embryophyte View MSA
123428550 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain