Gene : Lsat_1_v5_gn_3_139620 L. sativa V8
Defline:  (1 of 2) K17525 - chitinase domain-containing protein 1 (CHID1) Genomic Order:  3929
Name:  ? Lsat_1_v5_gn_3_139620 Secondary Identifier:  ? PAC:38917680
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_139620 0.5kb upstream 0.5kb upstream 4680   true Lsat_1_v8_lg_3: 253389734-253394413 Lactuca sativa
Lsat_1_v5_gn_3_139620 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 253389734-253390233 Lactuca sativa
Lsat_1_v5_gn_3_139620 0.5kb downstream 0.5kb downstream 4680   true Lsat_1_v8_lg_3: 253390234-253394913 Lactuca sativa
Lsat_1_v5_gn_3_139620 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 253394414-253394913 Lactuca sativa
Lsat_1_v5_gn_3_139620 1.0kb upstream 1.0kb upstream 5180   true Lsat_1_v8_lg_3: 253389234-253394413 Lactuca sativa
Lsat_1_v5_gn_3_139620 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 253389234-253390233 Lactuca sativa
Lsat_1_v5_gn_3_139620 1.0kb downstream 1.0kb downstream 5180   true Lsat_1_v8_lg_3: 253390234-253395413 Lactuca sativa
Lsat_1_v5_gn_3_139620 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 253394414-253395413 Lactuca sativa
Lsat_1_v5_gn_3_139620 2.0kb upstream 2.0kb upstream 6180   true Lsat_1_v8_lg_3: 253388234-253394413 Lactuca sativa
Lsat_1_v5_gn_3_139620 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 253388234-253390233 Lactuca sativa
Lsat_1_v5_gn_3_139620 2.0kb downstream 2.0kb downstream 6180   true Lsat_1_v8_lg_3: 253390234-253396413 Lactuca sativa
Lsat_1_v5_gn_3_139620 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 253394414-253396413 Lactuca sativa
Lsat_1_v5_gn_3_139620 5.0kb upstream 5.0kb upstream 9180   true Lsat_1_v8_lg_3: 253385234-253394413 Lactuca sativa
Lsat_1_v5_gn_3_139620 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 253385234-253390233 Lactuca sativa
Lsat_1_v5_gn_3_139620 5.0kb downstream 5.0kb downstream 9180   true Lsat_1_v8_lg_3: 253390234-253399413 Lactuca sativa
Lsat_1_v5_gn_3_139620 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 253394414-253399413 Lactuca sativa
Lsat_1_v5_gn_3_139620 10.0kb upstream 10.0kb upstream 14180   true Lsat_1_v8_lg_3: 253380234-253394413 Lactuca sativa
Lsat_1_v5_gn_3_139620 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 253380234-253390233 Lactuca sativa
Lsat_1_v5_gn_3_139620 10.0kb downstream 10.0kb downstream 14180   true Lsat_1_v8_lg_3: 253390234-253404413 Lactuca sativa
Lsat_1_v5_gn_3_139620 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 253394414-253404413 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475109 5263 Asterids View MSA
123750921 5271 Pentapetalae View MSA
122791613 5272 Eudicot View MSA
122044286 5273 Angiosperm View MSA
121344422 5274 Embryophyte View MSA
123425945 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain