Gene : Lsat_1_v5_gn_3_139600 L. sativa V8
Defline:  (1 of 2) K17525 - chitinase domain-containing protein 1 (CHID1) Genomic Order:  3928
Name:  ? Lsat_1_v5_gn_3_139600 Secondary Identifier:  ? PAC:38915243
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_139600 0.5kb upstream 0.5kb upstream 3340   true Lsat_1_v8_lg_3: 253383123-253386462 Lactuca sativa
Lsat_1_v5_gn_3_139600 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 253383123-253383622 Lactuca sativa
Lsat_1_v5_gn_3_139600 0.5kb downstream 0.5kb downstream 3340   true Lsat_1_v8_lg_3: 253383623-253386962 Lactuca sativa
Lsat_1_v5_gn_3_139600 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 253386463-253386962 Lactuca sativa
Lsat_1_v5_gn_3_139600 1.0kb upstream 1.0kb upstream 3840   true Lsat_1_v8_lg_3: 253382623-253386462 Lactuca sativa
Lsat_1_v5_gn_3_139600 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 253382623-253383622 Lactuca sativa
Lsat_1_v5_gn_3_139600 1.0kb downstream 1.0kb downstream 3840   true Lsat_1_v8_lg_3: 253383623-253387462 Lactuca sativa
Lsat_1_v5_gn_3_139600 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 253386463-253387462 Lactuca sativa
Lsat_1_v5_gn_3_139600 2.0kb upstream 2.0kb upstream 4840   true Lsat_1_v8_lg_3: 253381623-253386462 Lactuca sativa
Lsat_1_v5_gn_3_139600 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 253381623-253383622 Lactuca sativa
Lsat_1_v5_gn_3_139600 2.0kb downstream 2.0kb downstream 4840   true Lsat_1_v8_lg_3: 253383623-253388462 Lactuca sativa
Lsat_1_v5_gn_3_139600 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 253386463-253388462 Lactuca sativa
Lsat_1_v5_gn_3_139600 5.0kb upstream 5.0kb upstream 7840   true Lsat_1_v8_lg_3: 253378623-253386462 Lactuca sativa
Lsat_1_v5_gn_3_139600 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 253378623-253383622 Lactuca sativa
Lsat_1_v5_gn_3_139600 5.0kb downstream 5.0kb downstream 7840   true Lsat_1_v8_lg_3: 253383623-253391462 Lactuca sativa
Lsat_1_v5_gn_3_139600 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 253386463-253391462 Lactuca sativa
Lsat_1_v5_gn_3_139600 10.0kb upstream 10.0kb upstream 12840   true Lsat_1_v8_lg_3: 253373623-253386462 Lactuca sativa
Lsat_1_v5_gn_3_139600 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 253373623-253383622 Lactuca sativa
Lsat_1_v5_gn_3_139600 10.0kb downstream 10.0kb downstream 12840   true Lsat_1_v8_lg_3: 253383623-253396462 Lactuca sativa
Lsat_1_v5_gn_3_139600 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 253386463-253396462 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026747 5273 Angiosperm View MSA
121470260 5263 Asterids View MSA
123741965 5271 Pentapetalae View MSA
122793996 5272 Eudicot View MSA
121348650 5274 Embryophyte View MSA
123425865 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain