Gene : Lsat_1_v5_gn_2_99721 L. sativa V8
Defline:  (1 of 3) PTHR12419//PTHR12419:SF19 - OTU DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2808
Name:  ? Lsat_1_v5_gn_2_99721 Secondary Identifier:  ? PAC:38958114
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_2_99721 0.5kb upstream 0.5kb upstream 4617   true Lsat_1_v8_lg_2: 175624082-175628698 Lactuca sativa
Lsat_1_v5_gn_2_99721 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_2: 175628199-175628698 Lactuca sativa
Lsat_1_v5_gn_2_99721 0.5kb downstream 0.5kb downstream 4617   true Lsat_1_v8_lg_2: 175623582-175628198 Lactuca sativa
Lsat_1_v5_gn_2_99721 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_2: 175623582-175624081 Lactuca sativa
Lsat_1_v5_gn_2_99721 1.0kb upstream 1.0kb upstream 5117   true Lsat_1_v8_lg_2: 175624082-175629198 Lactuca sativa
Lsat_1_v5_gn_2_99721 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_2: 175628199-175629198 Lactuca sativa
Lsat_1_v5_gn_2_99721 1.0kb downstream 1.0kb downstream 5117   true Lsat_1_v8_lg_2: 175623082-175628198 Lactuca sativa
Lsat_1_v5_gn_2_99721 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_2: 175623082-175624081 Lactuca sativa
Lsat_1_v5_gn_2_99721 2.0kb upstream 2.0kb upstream 6117   true Lsat_1_v8_lg_2: 175624082-175630198 Lactuca sativa
Lsat_1_v5_gn_2_99721 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_2: 175628199-175630198 Lactuca sativa
Lsat_1_v5_gn_2_99721 2.0kb downstream 2.0kb downstream 6117   true Lsat_1_v8_lg_2: 175622082-175628198 Lactuca sativa
Lsat_1_v5_gn_2_99721 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_2: 175622082-175624081 Lactuca sativa
Lsat_1_v5_gn_2_99721 5.0kb upstream 5.0kb upstream 9117   true Lsat_1_v8_lg_2: 175624082-175633198 Lactuca sativa
Lsat_1_v5_gn_2_99721 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_2: 175628199-175633198 Lactuca sativa
Lsat_1_v5_gn_2_99721 5.0kb downstream 5.0kb downstream 9117   true Lsat_1_v8_lg_2: 175619082-175628198 Lactuca sativa
Lsat_1_v5_gn_2_99721 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_2: 175619082-175624081 Lactuca sativa
Lsat_1_v5_gn_2_99721 10.0kb upstream 10.0kb upstream 14117   true Lsat_1_v8_lg_2: 175624082-175638198 Lactuca sativa
Lsat_1_v5_gn_2_99721 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_2: 175628199-175638198 Lactuca sativa
Lsat_1_v5_gn_2_99721 10.0kb downstream 10.0kb downstream 14117   true Lsat_1_v8_lg_2: 175614082-175628198 Lactuca sativa
Lsat_1_v5_gn_2_99721 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_2: 175614082-175624081 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469988 5263 Asterids View MSA
123743617 5271 Pentapetalae View MSA
122787682 5272 Eudicot View MSA
122042328 5273 Angiosperm View MSA
121348332 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain