Gene : Lsat_1_v5_gn_3_100120 L. sativa V8
Defline:  (1 of 3) PTHR22950//PTHR22950:SF280 - AMINO ACID TRANSPORTER // TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN Genomic Order:  2934
Name:  ? Lsat_1_v5_gn_3_100120 Secondary Identifier:  ? PAC:38918920
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_100120 0.5kb upstream 0.5kb upstream 4569   true Lsat_1_v8_lg_3: 159305177-159309745 Lactuca sativa
Lsat_1_v5_gn_3_100120 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 159305177-159305676 Lactuca sativa
Lsat_1_v5_gn_3_100120 0.5kb downstream 0.5kb downstream 4569   true Lsat_1_v8_lg_3: 159305677-159310245 Lactuca sativa
Lsat_1_v5_gn_3_100120 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 159309746-159310245 Lactuca sativa
Lsat_1_v5_gn_3_100120 1.0kb upstream 1.0kb upstream 5069   true Lsat_1_v8_lg_3: 159304677-159309745 Lactuca sativa
Lsat_1_v5_gn_3_100120 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 159304677-159305676 Lactuca sativa
Lsat_1_v5_gn_3_100120 1.0kb downstream 1.0kb downstream 5069   true Lsat_1_v8_lg_3: 159305677-159310745 Lactuca sativa
Lsat_1_v5_gn_3_100120 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 159309746-159310745 Lactuca sativa
Lsat_1_v5_gn_3_100120 2.0kb upstream 2.0kb upstream 6069   true Lsat_1_v8_lg_3: 159303677-159309745 Lactuca sativa
Lsat_1_v5_gn_3_100120 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 159303677-159305676 Lactuca sativa
Lsat_1_v5_gn_3_100120 2.0kb downstream 2.0kb downstream 6069   true Lsat_1_v8_lg_3: 159305677-159311745 Lactuca sativa
Lsat_1_v5_gn_3_100120 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 159309746-159311745 Lactuca sativa
Lsat_1_v5_gn_3_100120 5.0kb upstream 5.0kb upstream 9069   true Lsat_1_v8_lg_3: 159300677-159309745 Lactuca sativa
Lsat_1_v5_gn_3_100120 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 159300677-159305676 Lactuca sativa
Lsat_1_v5_gn_3_100120 5.0kb downstream 5.0kb downstream 9069   true Lsat_1_v8_lg_3: 159305677-159314745 Lactuca sativa
Lsat_1_v5_gn_3_100120 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 159309746-159314745 Lactuca sativa
Lsat_1_v5_gn_3_100120 10.0kb upstream 10.0kb upstream 14069   true Lsat_1_v8_lg_3: 159295677-159309745 Lactuca sativa
Lsat_1_v5_gn_3_100120 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 159295677-159305676 Lactuca sativa
Lsat_1_v5_gn_3_100120 10.0kb downstream 10.0kb downstream 14069   true Lsat_1_v8_lg_3: 159305677-159319745 Lactuca sativa
Lsat_1_v5_gn_3_100120 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 159309746-159319745 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041365 5273 Angiosperm View MSA
121471420 5263 Asterids View MSA
123745123 5271 Pentapetalae View MSA
122792939 5272 Eudicot View MSA
123429000 5275 Viridiplantae View MSA
121349038 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain