Gene : Lsat_1_v5_gn_3_104360 L. sativa V8
Defline:  (1 of 1) PTHR13317//PTHR13317:SF4 - UNCHARACTERIZED // TRANSMEMBRANE ANTERIOR POSTERIOR TRANSFORMATION PROTEIN 1 HOMOLOG Genomic Order:  3012
Name:  ? Lsat_1_v5_gn_3_104360 Secondary Identifier:  ? PAC:38916627
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_104360 0.5kb upstream 0.5kb upstream 6542   true Lsat_1_v8_lg_3: 167055307-167061848 Lactuca sativa
Lsat_1_v5_gn_3_104360 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 167055307-167055806 Lactuca sativa
Lsat_1_v5_gn_3_104360 0.5kb downstream 0.5kb downstream 6542   true Lsat_1_v8_lg_3: 167055807-167062348 Lactuca sativa
Lsat_1_v5_gn_3_104360 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 167061849-167062348 Lactuca sativa
Lsat_1_v5_gn_3_104360 1.0kb upstream 1.0kb upstream 7042   true Lsat_1_v8_lg_3: 167054807-167061848 Lactuca sativa
Lsat_1_v5_gn_3_104360 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 167054807-167055806 Lactuca sativa
Lsat_1_v5_gn_3_104360 1.0kb downstream 1.0kb downstream 7042   true Lsat_1_v8_lg_3: 167055807-167062848 Lactuca sativa
Lsat_1_v5_gn_3_104360 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 167061849-167062848 Lactuca sativa
Lsat_1_v5_gn_3_104360 2.0kb upstream 2.0kb upstream 8042   true Lsat_1_v8_lg_3: 167053807-167061848 Lactuca sativa
Lsat_1_v5_gn_3_104360 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 167053807-167055806 Lactuca sativa
Lsat_1_v5_gn_3_104360 2.0kb downstream 2.0kb downstream 8042   true Lsat_1_v8_lg_3: 167055807-167063848 Lactuca sativa
Lsat_1_v5_gn_3_104360 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 167061849-167063848 Lactuca sativa
Lsat_1_v5_gn_3_104360 5.0kb upstream 5.0kb upstream 11042   true Lsat_1_v8_lg_3: 167050807-167061848 Lactuca sativa
Lsat_1_v5_gn_3_104360 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 167050807-167055806 Lactuca sativa
Lsat_1_v5_gn_3_104360 5.0kb downstream 5.0kb downstream 11042   true Lsat_1_v8_lg_3: 167055807-167066848 Lactuca sativa
Lsat_1_v5_gn_3_104360 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 167061849-167066848 Lactuca sativa
Lsat_1_v5_gn_3_104360 10.0kb upstream 10.0kb upstream 16042   true Lsat_1_v8_lg_3: 167045807-167061848 Lactuca sativa
Lsat_1_v5_gn_3_104360 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 167045807-167055806 Lactuca sativa
Lsat_1_v5_gn_3_104360 10.0kb downstream 10.0kb downstream 16042   true Lsat_1_v8_lg_3: 167055807-167071848 Lactuca sativa
Lsat_1_v5_gn_3_104360 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 167061849-167071848 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474219 5263 Asterids View MSA
123752415 5271 Pentapetalae View MSA
122788398 5272 Eudicot View MSA
122042110 5273 Angiosperm View MSA
121347997 5274 Embryophyte View MSA
123426226 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain