Gene : Lsat_1_v5_gn_3_104200 L. sativa V8
Defline:  (1 of 34) 1.10.3.9 - Photosystem II Genomic Order:  3068
Name:  ? Lsat_1_v5_gn_3_104200 Secondary Identifier:  ? PAC:38916618
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PHOTOALL-PWY Lactuca sativa pathologic  
Lsativa PWY-101 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_104200 0.5kb upstream 0.5kb upstream 794   true Lsat_1_v8_lg_3: 174509197-174509990 Lactuca sativa
Lsat_1_v5_gn_3_104200 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 174509197-174509696 Lactuca sativa
Lsat_1_v5_gn_3_104200 0.5kb downstream 0.5kb downstream 794   true Lsat_1_v8_lg_3: 174509697-174510490 Lactuca sativa
Lsat_1_v5_gn_3_104200 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 174509991-174510490 Lactuca sativa
Lsat_1_v5_gn_3_104200 1.0kb upstream 1.0kb upstream 1294   true Lsat_1_v8_lg_3: 174508697-174509990 Lactuca sativa
Lsat_1_v5_gn_3_104200 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 174508697-174509696 Lactuca sativa
Lsat_1_v5_gn_3_104200 1.0kb downstream 1.0kb downstream 1294   true Lsat_1_v8_lg_3: 174509697-174510990 Lactuca sativa
Lsat_1_v5_gn_3_104200 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 174509991-174510990 Lactuca sativa
Lsat_1_v5_gn_3_104200 2.0kb upstream 2.0kb upstream 2294   true Lsat_1_v8_lg_3: 174507697-174509990 Lactuca sativa
Lsat_1_v5_gn_3_104200 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 174507697-174509696 Lactuca sativa
Lsat_1_v5_gn_3_104200 2.0kb downstream 2.0kb downstream 2294   true Lsat_1_v8_lg_3: 174509697-174511990 Lactuca sativa
Lsat_1_v5_gn_3_104200 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 174509991-174511990 Lactuca sativa
Lsat_1_v5_gn_3_104200 5.0kb upstream 5.0kb upstream 5294   true Lsat_1_v8_lg_3: 174504697-174509990 Lactuca sativa
Lsat_1_v5_gn_3_104200 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 174504697-174509696 Lactuca sativa
Lsat_1_v5_gn_3_104200 5.0kb downstream 5.0kb downstream 5294   true Lsat_1_v8_lg_3: 174509697-174514990 Lactuca sativa
Lsat_1_v5_gn_3_104200 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 174509991-174514990 Lactuca sativa
Lsat_1_v5_gn_3_104200 10.0kb upstream 10.0kb upstream 10294   true Lsat_1_v8_lg_3: 174499697-174509990 Lactuca sativa
Lsat_1_v5_gn_3_104200 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 174499697-174509696 Lactuca sativa
Lsat_1_v5_gn_3_104200 10.0kb downstream 10.0kb downstream 10294   true Lsat_1_v8_lg_3: 174509697-174519990 Lactuca sativa
Lsat_1_v5_gn_3_104200 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 174509991-174519990 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121451135 5263 Asterids View MSA
123753442 5271 Pentapetalae View MSA
122794783 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain