Gene : Lsat_1_v5_gn_3_111900 L. sativa V8
Defline:  (1 of 1) KOG1092 - Ypt/Rab-specific GTPase-activating protein GYP1 Genomic Order:  3251
Name:  ? Lsat_1_v5_gn_3_111900 Secondary Identifier:  ? PAC:38918367
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_111900 0.5kb upstream 0.5kb upstream 5506   true Lsat_1_v8_lg_3: 187779194-187784699 Lactuca sativa
Lsat_1_v5_gn_3_111900 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 187779194-187779693 Lactuca sativa
Lsat_1_v5_gn_3_111900 0.5kb downstream 0.5kb downstream 5506   true Lsat_1_v8_lg_3: 187779694-187785199 Lactuca sativa
Lsat_1_v5_gn_3_111900 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 187784700-187785199 Lactuca sativa
Lsat_1_v5_gn_3_111900 1.0kb upstream 1.0kb upstream 6006   true Lsat_1_v8_lg_3: 187778694-187784699 Lactuca sativa
Lsat_1_v5_gn_3_111900 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 187778694-187779693 Lactuca sativa
Lsat_1_v5_gn_3_111900 1.0kb downstream 1.0kb downstream 6006   true Lsat_1_v8_lg_3: 187779694-187785699 Lactuca sativa
Lsat_1_v5_gn_3_111900 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 187784700-187785699 Lactuca sativa
Lsat_1_v5_gn_3_111900 2.0kb upstream 2.0kb upstream 7006   true Lsat_1_v8_lg_3: 187777694-187784699 Lactuca sativa
Lsat_1_v5_gn_3_111900 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 187777694-187779693 Lactuca sativa
Lsat_1_v5_gn_3_111900 2.0kb downstream 2.0kb downstream 7006   true Lsat_1_v8_lg_3: 187779694-187786699 Lactuca sativa
Lsat_1_v5_gn_3_111900 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 187784700-187786699 Lactuca sativa
Lsat_1_v5_gn_3_111900 5.0kb upstream 5.0kb upstream 10006   true Lsat_1_v8_lg_3: 187774694-187784699 Lactuca sativa
Lsat_1_v5_gn_3_111900 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 187774694-187779693 Lactuca sativa
Lsat_1_v5_gn_3_111900 5.0kb downstream 5.0kb downstream 10006   true Lsat_1_v8_lg_3: 187779694-187789699 Lactuca sativa
Lsat_1_v5_gn_3_111900 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 187784700-187789699 Lactuca sativa
Lsat_1_v5_gn_3_111900 10.0kb upstream 10.0kb upstream 15006   true Lsat_1_v8_lg_3: 187769694-187784699 Lactuca sativa
Lsat_1_v5_gn_3_111900 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 187769694-187779693 Lactuca sativa
Lsat_1_v5_gn_3_111900 10.0kb downstream 10.0kb downstream 15006   true Lsat_1_v8_lg_3: 187779694-187794699 Lactuca sativa
Lsat_1_v5_gn_3_111900 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 187784700-187794699 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121443126 5263 Asterids Singleton cluster - no MSA
123749842 5271 Pentapetalae View MSA
122786792 5272 Eudicot View MSA
122047637 5273 Angiosperm View MSA
121347047 5274 Embryophyte View MSA
123426413 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain