Gene : Lsat_1_v5_gn_3_111240 L. sativa V8
Defline:  (1 of 1) 1.3.3.3 - Coproporphyrinogen oxidase / Coproporphyrinogenase Genomic Order:  3218
Name:  ? Lsat_1_v5_gn_3_111240 Secondary Identifier:  ? PAC:38919132
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa CHLOROPHYLL-SYN Lactuca sativa pathologic  
Lsativa HEME-BIOSYNTHESIS-II Lactuca sativa pathologic  
Lsativa PWY-5918 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_111240 0.5kb upstream 0.5kb upstream 4615   true Lsat_1_v8_lg_3: 185260989-185265603 Lactuca sativa
Lsat_1_v5_gn_3_111240 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 185260989-185261488 Lactuca sativa
Lsat_1_v5_gn_3_111240 0.5kb downstream 0.5kb downstream 4615   true Lsat_1_v8_lg_3: 185261489-185266103 Lactuca sativa
Lsat_1_v5_gn_3_111240 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 185265604-185266103 Lactuca sativa
Lsat_1_v5_gn_3_111240 1.0kb upstream 1.0kb upstream 5115   true Lsat_1_v8_lg_3: 185260489-185265603 Lactuca sativa
Lsat_1_v5_gn_3_111240 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 185260489-185261488 Lactuca sativa
Lsat_1_v5_gn_3_111240 1.0kb downstream 1.0kb downstream 5115   true Lsat_1_v8_lg_3: 185261489-185266603 Lactuca sativa
Lsat_1_v5_gn_3_111240 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 185265604-185266603 Lactuca sativa
Lsat_1_v5_gn_3_111240 2.0kb upstream 2.0kb upstream 6115   true Lsat_1_v8_lg_3: 185259489-185265603 Lactuca sativa
Lsat_1_v5_gn_3_111240 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 185259489-185261488 Lactuca sativa
Lsat_1_v5_gn_3_111240 2.0kb downstream 2.0kb downstream 6115   true Lsat_1_v8_lg_3: 185261489-185267603 Lactuca sativa
Lsat_1_v5_gn_3_111240 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 185265604-185267603 Lactuca sativa
Lsat_1_v5_gn_3_111240 5.0kb upstream 5.0kb upstream 9115   true Lsat_1_v8_lg_3: 185256489-185265603 Lactuca sativa
Lsat_1_v5_gn_3_111240 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 185256489-185261488 Lactuca sativa
Lsat_1_v5_gn_3_111240 5.0kb downstream 5.0kb downstream 9115   true Lsat_1_v8_lg_3: 185261489-185270603 Lactuca sativa
Lsat_1_v5_gn_3_111240 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 185265604-185270603 Lactuca sativa
Lsat_1_v5_gn_3_111240 10.0kb upstream 10.0kb upstream 14115   true Lsat_1_v8_lg_3: 185251489-185265603 Lactuca sativa
Lsat_1_v5_gn_3_111240 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 185251489-185261488 Lactuca sativa
Lsat_1_v5_gn_3_111240 10.0kb downstream 10.0kb downstream 14115   true Lsat_1_v8_lg_3: 185261489-185275603 Lactuca sativa
Lsat_1_v5_gn_3_111240 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 185265604-185275603 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468606 5263 Asterids View MSA
123737615 5271 Pentapetalae View MSA
122790941 5272 Eudicot View MSA
122043250 5273 Angiosperm View MSA
121345223 5274 Embryophyte View MSA
123424727 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain