Gene : Lsat_1_v5_gn_3_1160 L. sativa V8
Defline:  (1 of 1) K14827 - pre-rRNA-processing protein IPI1 (IPI1, TEX10) Genomic Order:  14
Name:  ? Lsat_1_v5_gn_3_1160 Secondary Identifier:  ? PAC:38915975
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_1160 0.5kb upstream 0.5kb upstream 6374   true Lsat_1_v8_lg_3: 920911-927284 Lactuca sativa
Lsat_1_v5_gn_3_1160 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 920911-921410 Lactuca sativa
Lsat_1_v5_gn_3_1160 0.5kb downstream 0.5kb downstream 6374   true Lsat_1_v8_lg_3: 921411-927784 Lactuca sativa
Lsat_1_v5_gn_3_1160 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 927285-927784 Lactuca sativa
Lsat_1_v5_gn_3_1160 1.0kb upstream 1.0kb upstream 6874   true Lsat_1_v8_lg_3: 920411-927284 Lactuca sativa
Lsat_1_v5_gn_3_1160 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 920411-921410 Lactuca sativa
Lsat_1_v5_gn_3_1160 1.0kb downstream 1.0kb downstream 6874   true Lsat_1_v8_lg_3: 921411-928284 Lactuca sativa
Lsat_1_v5_gn_3_1160 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 927285-928284 Lactuca sativa
Lsat_1_v5_gn_3_1160 2.0kb upstream 2.0kb upstream 7874   true Lsat_1_v8_lg_3: 919411-927284 Lactuca sativa
Lsat_1_v5_gn_3_1160 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 919411-921410 Lactuca sativa
Lsat_1_v5_gn_3_1160 2.0kb downstream 2.0kb downstream 7874   true Lsat_1_v8_lg_3: 921411-929284 Lactuca sativa
Lsat_1_v5_gn_3_1160 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 927285-929284 Lactuca sativa
Lsat_1_v5_gn_3_1160 5.0kb upstream 5.0kb upstream 10874   true Lsat_1_v8_lg_3: 916411-927284 Lactuca sativa
Lsat_1_v5_gn_3_1160 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 916411-921410 Lactuca sativa
Lsat_1_v5_gn_3_1160 5.0kb downstream 5.0kb downstream 10874   true Lsat_1_v8_lg_3: 921411-932284 Lactuca sativa
Lsat_1_v5_gn_3_1160 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 927285-932284 Lactuca sativa
Lsat_1_v5_gn_3_1160 10.0kb upstream 10.0kb upstream 15874   true Lsat_1_v8_lg_3: 911411-927284 Lactuca sativa
Lsat_1_v5_gn_3_1160 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 911411-921410 Lactuca sativa
Lsat_1_v5_gn_3_1160 10.0kb downstream 10.0kb downstream 15874   true Lsat_1_v8_lg_3: 921411-937284 Lactuca sativa
Lsat_1_v5_gn_3_1160 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 927285-937284 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029601 5273 Angiosperm View MSA
121473718 5263 Asterids View MSA
123740186 5271 Pentapetalae View MSA
122789427 5272 Eudicot View MSA
121346343 5274 Embryophyte View MSA
123424675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain