Gene : Lsat_1_v5_gn_3_116161 L. sativa V8
Defline:  (1 of 13) K11593 - eukaryotic translation initiation factor 2C (ELF2C, AGO) Genomic Order:  3351
Name:  ? Lsat_1_v5_gn_3_116161 Secondary Identifier:  ? PAC:38918392
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_116161 0.5kb upstream 0.5kb upstream 8923   true Lsat_1_v8_lg_3: 194247042-194255964 Lactuca sativa
Lsat_1_v5_gn_3_116161 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 194255465-194255964 Lactuca sativa
Lsat_1_v5_gn_3_116161 0.5kb downstream 0.5kb downstream 8923   true Lsat_1_v8_lg_3: 194246542-194255464 Lactuca sativa
Lsat_1_v5_gn_3_116161 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 194246542-194247041 Lactuca sativa
Lsat_1_v5_gn_3_116161 1.0kb upstream 1.0kb upstream 9423   true Lsat_1_v8_lg_3: 194247042-194256464 Lactuca sativa
Lsat_1_v5_gn_3_116161 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 194255465-194256464 Lactuca sativa
Lsat_1_v5_gn_3_116161 1.0kb downstream 1.0kb downstream 9423   true Lsat_1_v8_lg_3: 194246042-194255464 Lactuca sativa
Lsat_1_v5_gn_3_116161 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 194246042-194247041 Lactuca sativa
Lsat_1_v5_gn_3_116161 2.0kb upstream 2.0kb upstream 10423   true Lsat_1_v8_lg_3: 194247042-194257464 Lactuca sativa
Lsat_1_v5_gn_3_116161 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 194255465-194257464 Lactuca sativa
Lsat_1_v5_gn_3_116161 2.0kb downstream 2.0kb downstream 10423   true Lsat_1_v8_lg_3: 194245042-194255464 Lactuca sativa
Lsat_1_v5_gn_3_116161 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 194245042-194247041 Lactuca sativa
Lsat_1_v5_gn_3_116161 5.0kb upstream 5.0kb upstream 13423   true Lsat_1_v8_lg_3: 194247042-194260464 Lactuca sativa
Lsat_1_v5_gn_3_116161 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 194255465-194260464 Lactuca sativa
Lsat_1_v5_gn_3_116161 5.0kb downstream 5.0kb downstream 13423   true Lsat_1_v8_lg_3: 194242042-194255464 Lactuca sativa
Lsat_1_v5_gn_3_116161 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 194242042-194247041 Lactuca sativa
Lsat_1_v5_gn_3_116161 10.0kb upstream 10.0kb upstream 18423   true Lsat_1_v8_lg_3: 194247042-194265464 Lactuca sativa
Lsat_1_v5_gn_3_116161 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 194255465-194265464 Lactuca sativa
Lsat_1_v5_gn_3_116161 10.0kb downstream 10.0kb downstream 18423   true Lsat_1_v8_lg_3: 194237042-194255464 Lactuca sativa
Lsat_1_v5_gn_3_116161 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 194237042-194247041 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477530 5263 Asterids View MSA
123750944 5271 Pentapetalae View MSA
122796647 5272 Eudicot View MSA
122050518 5273 Angiosperm View MSA
121349761 5274 Embryophyte View MSA
123381432 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain