Gene : Lsat_1_v5_gn_3_117461 L. sativa V8
Defline:  (1 of 2) K12832 - splicing factor 3B subunit 5 (SF3B5, SF3B10) Genomic Order:  3395
Name:  ? Lsat_1_v5_gn_3_117461 Secondary Identifier:  ? PAC:38918740
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_117461 0.5kb upstream 0.5kb upstream 2529   true Lsat_1_v8_lg_3: 196253600-196256128 Lactuca sativa
Lsat_1_v5_gn_3_117461 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 196255629-196256128 Lactuca sativa
Lsat_1_v5_gn_3_117461 0.5kb downstream 0.5kb downstream 2529   true Lsat_1_v8_lg_3: 196253100-196255628 Lactuca sativa
Lsat_1_v5_gn_3_117461 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 196253100-196253599 Lactuca sativa
Lsat_1_v5_gn_3_117461 1.0kb upstream 1.0kb upstream 3029   true Lsat_1_v8_lg_3: 196253600-196256628 Lactuca sativa
Lsat_1_v5_gn_3_117461 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 196255629-196256628 Lactuca sativa
Lsat_1_v5_gn_3_117461 1.0kb downstream 1.0kb downstream 3029   true Lsat_1_v8_lg_3: 196252600-196255628 Lactuca sativa
Lsat_1_v5_gn_3_117461 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 196252600-196253599 Lactuca sativa
Lsat_1_v5_gn_3_117461 2.0kb upstream 2.0kb upstream 4029   true Lsat_1_v8_lg_3: 196253600-196257628 Lactuca sativa
Lsat_1_v5_gn_3_117461 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 196255629-196257628 Lactuca sativa
Lsat_1_v5_gn_3_117461 2.0kb downstream 2.0kb downstream 4029   true Lsat_1_v8_lg_3: 196251600-196255628 Lactuca sativa
Lsat_1_v5_gn_3_117461 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 196251600-196253599 Lactuca sativa
Lsat_1_v5_gn_3_117461 5.0kb upstream 5.0kb upstream 7029   true Lsat_1_v8_lg_3: 196253600-196260628 Lactuca sativa
Lsat_1_v5_gn_3_117461 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 196255629-196260628 Lactuca sativa
Lsat_1_v5_gn_3_117461 5.0kb downstream 5.0kb downstream 7029   true Lsat_1_v8_lg_3: 196248600-196255628 Lactuca sativa
Lsat_1_v5_gn_3_117461 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 196248600-196253599 Lactuca sativa
Lsat_1_v5_gn_3_117461 10.0kb upstream 10.0kb upstream 12029   true Lsat_1_v8_lg_3: 196253600-196265628 Lactuca sativa
Lsat_1_v5_gn_3_117461 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 196255629-196265628 Lactuca sativa
Lsat_1_v5_gn_3_117461 10.0kb downstream 10.0kb downstream 12029   true Lsat_1_v8_lg_3: 196243600-196255628 Lactuca sativa
Lsat_1_v5_gn_3_117461 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 196243600-196253599 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027648 5273 Angiosperm View MSA
121443184 5263 Asterids Singleton cluster - no MSA
123755175 5271 Pentapetalae View MSA
122776472 5272 Eudicot View MSA
123428927 5275 Viridiplantae View MSA
121347588 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain