Gene : Lsat_1_v5_gn_3_32661 L. sativa V8
Defline:  (1 of 1) PTHR10683//PTHR10683:SF6 - TRANSALDOLASE // TRANSALDOLASE-RELATED Genomic Order:  1009
Name:  ? Lsat_1_v5_gn_3_32661 Secondary Identifier:  ? PAC:38917593
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa NONOXIPENT-PWY Lactuca sativa pathologic  
Lsativa PENTOSE-P-PWY Lactuca sativa pathologic  
Lsativa PWY-5723 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_32661 0.5kb upstream 0.5kb upstream 3510   true Lsat_1_v8_lg_3: 42356960-42360469 Lactuca sativa
Lsat_1_v5_gn_3_32661 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 42356960-42357459 Lactuca sativa
Lsat_1_v5_gn_3_32661 0.5kb downstream 0.5kb downstream 3510   true Lsat_1_v8_lg_3: 42357460-42360969 Lactuca sativa
Lsat_1_v5_gn_3_32661 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 42360470-42360969 Lactuca sativa
Lsat_1_v5_gn_3_32661 1.0kb upstream 1.0kb upstream 4010   true Lsat_1_v8_lg_3: 42356460-42360469 Lactuca sativa
Lsat_1_v5_gn_3_32661 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 42356460-42357459 Lactuca sativa
Lsat_1_v5_gn_3_32661 1.0kb downstream 1.0kb downstream 4010   true Lsat_1_v8_lg_3: 42357460-42361469 Lactuca sativa
Lsat_1_v5_gn_3_32661 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 42360470-42361469 Lactuca sativa
Lsat_1_v5_gn_3_32661 2.0kb upstream 2.0kb upstream 5010   true Lsat_1_v8_lg_3: 42355460-42360469 Lactuca sativa
Lsat_1_v5_gn_3_32661 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 42355460-42357459 Lactuca sativa
Lsat_1_v5_gn_3_32661 2.0kb downstream 2.0kb downstream 5010   true Lsat_1_v8_lg_3: 42357460-42362469 Lactuca sativa
Lsat_1_v5_gn_3_32661 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 42360470-42362469 Lactuca sativa
Lsat_1_v5_gn_3_32661 5.0kb upstream 5.0kb upstream 8010   true Lsat_1_v8_lg_3: 42352460-42360469 Lactuca sativa
Lsat_1_v5_gn_3_32661 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 42352460-42357459 Lactuca sativa
Lsat_1_v5_gn_3_32661 5.0kb downstream 5.0kb downstream 8010   true Lsat_1_v8_lg_3: 42357460-42365469 Lactuca sativa
Lsat_1_v5_gn_3_32661 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 42360470-42365469 Lactuca sativa
Lsat_1_v5_gn_3_32661 10.0kb upstream 10.0kb upstream 13010   true Lsat_1_v8_lg_3: 42347460-42360469 Lactuca sativa
Lsat_1_v5_gn_3_32661 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 42347460-42357459 Lactuca sativa
Lsat_1_v5_gn_3_32661 10.0kb downstream 10.0kb downstream 13010   true Lsat_1_v8_lg_3: 42357460-42370469 Lactuca sativa
Lsat_1_v5_gn_3_32661 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 42360470-42370469 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467078 5263 Asterids View MSA
123743559 5271 Pentapetalae View MSA
122786857 5272 Eudicot View MSA
122044911 5273 Angiosperm View MSA
121343866 5274 Embryophyte View MSA
123379934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain