Gene : Lsat_1_v5_gn_3_32880 L. sativa V8
Defline:  (1 of 2) PF02620 - Uncharacterized ACR, COG1399 (DUF177) Genomic Order:  1085
Name:  ? Lsat_1_v5_gn_3_32880 Secondary Identifier:  ? PAC:38916372
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_32880 0.5kb upstream 0.5kb upstream 2538   true Lsat_1_v8_lg_3: 44734432-44736969 Lactuca sativa
Lsat_1_v5_gn_3_32880 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 44734432-44734931 Lactuca sativa
Lsat_1_v5_gn_3_32880 0.5kb downstream 0.5kb downstream 2538   true Lsat_1_v8_lg_3: 44734932-44737469 Lactuca sativa
Lsat_1_v5_gn_3_32880 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 44736970-44737469 Lactuca sativa
Lsat_1_v5_gn_3_32880 1.0kb upstream 1.0kb upstream 3038   true Lsat_1_v8_lg_3: 44733932-44736969 Lactuca sativa
Lsat_1_v5_gn_3_32880 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 44733932-44734931 Lactuca sativa
Lsat_1_v5_gn_3_32880 1.0kb downstream 1.0kb downstream 3038   true Lsat_1_v8_lg_3: 44734932-44737969 Lactuca sativa
Lsat_1_v5_gn_3_32880 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 44736970-44737969 Lactuca sativa
Lsat_1_v5_gn_3_32880 2.0kb upstream 2.0kb upstream 4038   true Lsat_1_v8_lg_3: 44732932-44736969 Lactuca sativa
Lsat_1_v5_gn_3_32880 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 44732932-44734931 Lactuca sativa
Lsat_1_v5_gn_3_32880 2.0kb downstream 2.0kb downstream 4038   true Lsat_1_v8_lg_3: 44734932-44738969 Lactuca sativa
Lsat_1_v5_gn_3_32880 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 44736970-44738969 Lactuca sativa
Lsat_1_v5_gn_3_32880 5.0kb upstream 5.0kb upstream 7038   true Lsat_1_v8_lg_3: 44729932-44736969 Lactuca sativa
Lsat_1_v5_gn_3_32880 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 44729932-44734931 Lactuca sativa
Lsat_1_v5_gn_3_32880 5.0kb downstream 5.0kb downstream 7038   true Lsat_1_v8_lg_3: 44734932-44741969 Lactuca sativa
Lsat_1_v5_gn_3_32880 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 44736970-44741969 Lactuca sativa
Lsat_1_v5_gn_3_32880 10.0kb upstream 10.0kb upstream 12038   true Lsat_1_v8_lg_3: 44724932-44736969 Lactuca sativa
Lsat_1_v5_gn_3_32880 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 44724932-44734931 Lactuca sativa
Lsat_1_v5_gn_3_32880 10.0kb downstream 10.0kb downstream 12038   true Lsat_1_v8_lg_3: 44734932-44746969 Lactuca sativa
Lsat_1_v5_gn_3_32880 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 44736970-44746969 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466788 5263 Asterids View MSA
123736683 5271 Pentapetalae View MSA
122787330 5272 Eudicot View MSA
122051135 5273 Angiosperm View MSA
121345181 5274 Embryophyte View MSA
123380171 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain