Gene : Lsat_1_v5_gn_3_34541 L. sativa V8
Defline:  (1 of 1) PTHR11669//PTHR11669:SF9 - REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT // REPLICATION FACTOR C SUBUNIT 5 Genomic Order:  1140
Name:  ? Lsat_1_v5_gn_3_34541 Secondary Identifier:  ? PAC:38917164
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_34541 0.5kb upstream 0.5kb upstream 3300   true Lsat_1_v8_lg_3: 46613106-46616405 Lactuca sativa
Lsat_1_v5_gn_3_34541 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 46613106-46613605 Lactuca sativa
Lsat_1_v5_gn_3_34541 0.5kb downstream 0.5kb downstream 3300   true Lsat_1_v8_lg_3: 46613606-46616905 Lactuca sativa
Lsat_1_v5_gn_3_34541 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 46616406-46616905 Lactuca sativa
Lsat_1_v5_gn_3_34541 1.0kb upstream 1.0kb upstream 3800   true Lsat_1_v8_lg_3: 46612606-46616405 Lactuca sativa
Lsat_1_v5_gn_3_34541 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 46612606-46613605 Lactuca sativa
Lsat_1_v5_gn_3_34541 1.0kb downstream 1.0kb downstream 3800   true Lsat_1_v8_lg_3: 46613606-46617405 Lactuca sativa
Lsat_1_v5_gn_3_34541 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 46616406-46617405 Lactuca sativa
Lsat_1_v5_gn_3_34541 2.0kb upstream 2.0kb upstream 4800   true Lsat_1_v8_lg_3: 46611606-46616405 Lactuca sativa
Lsat_1_v5_gn_3_34541 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 46611606-46613605 Lactuca sativa
Lsat_1_v5_gn_3_34541 2.0kb downstream 2.0kb downstream 4800   true Lsat_1_v8_lg_3: 46613606-46618405 Lactuca sativa
Lsat_1_v5_gn_3_34541 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 46616406-46618405 Lactuca sativa
Lsat_1_v5_gn_3_34541 5.0kb upstream 5.0kb upstream 7800   true Lsat_1_v8_lg_3: 46608606-46616405 Lactuca sativa
Lsat_1_v5_gn_3_34541 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 46608606-46613605 Lactuca sativa
Lsat_1_v5_gn_3_34541 5.0kb downstream 5.0kb downstream 7800   true Lsat_1_v8_lg_3: 46613606-46621405 Lactuca sativa
Lsat_1_v5_gn_3_34541 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 46616406-46621405 Lactuca sativa
Lsat_1_v5_gn_3_34541 10.0kb upstream 10.0kb upstream 12800   true Lsat_1_v8_lg_3: 46603606-46616405 Lactuca sativa
Lsat_1_v5_gn_3_34541 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 46603606-46613605 Lactuca sativa
Lsat_1_v5_gn_3_34541 10.0kb downstream 10.0kb downstream 12800   true Lsat_1_v8_lg_3: 46613606-46626405 Lactuca sativa
Lsat_1_v5_gn_3_34541 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 46616406-46626405 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470103 5263 Asterids View MSA
123738354 5271 Pentapetalae View MSA
122793599 5272 Eudicot View MSA
122045152 5273 Angiosperm View MSA
121344274 5274 Embryophyte View MSA
123424030 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain