Gene : Lsat_1_v5_gn_3_34501 L. sativa V8
Defline:  (1 of 6) KOG2521 - Uncharacterized conserved protein Genomic Order:  1142
Name:  ? Lsat_1_v5_gn_3_34501 Secondary Identifier:  ? PAC:38920757
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_34501 0.5kb upstream 0.5kb upstream 3800   true Lsat_1_v8_lg_3: 46624363-46628162 Lactuca sativa
Lsat_1_v5_gn_3_34501 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 46624363-46624862 Lactuca sativa
Lsat_1_v5_gn_3_34501 0.5kb downstream 0.5kb downstream 3800   true Lsat_1_v8_lg_3: 46624863-46628662 Lactuca sativa
Lsat_1_v5_gn_3_34501 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 46628163-46628662 Lactuca sativa
Lsat_1_v5_gn_3_34501 1.0kb upstream 1.0kb upstream 4300   true Lsat_1_v8_lg_3: 46623863-46628162 Lactuca sativa
Lsat_1_v5_gn_3_34501 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 46623863-46624862 Lactuca sativa
Lsat_1_v5_gn_3_34501 1.0kb downstream 1.0kb downstream 4300   true Lsat_1_v8_lg_3: 46624863-46629162 Lactuca sativa
Lsat_1_v5_gn_3_34501 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 46628163-46629162 Lactuca sativa
Lsat_1_v5_gn_3_34501 2.0kb upstream 2.0kb upstream 5300   true Lsat_1_v8_lg_3: 46622863-46628162 Lactuca sativa
Lsat_1_v5_gn_3_34501 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 46622863-46624862 Lactuca sativa
Lsat_1_v5_gn_3_34501 2.0kb downstream 2.0kb downstream 5300   true Lsat_1_v8_lg_3: 46624863-46630162 Lactuca sativa
Lsat_1_v5_gn_3_34501 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 46628163-46630162 Lactuca sativa
Lsat_1_v5_gn_3_34501 5.0kb upstream 5.0kb upstream 8300   true Lsat_1_v8_lg_3: 46619863-46628162 Lactuca sativa
Lsat_1_v5_gn_3_34501 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 46619863-46624862 Lactuca sativa
Lsat_1_v5_gn_3_34501 5.0kb downstream 5.0kb downstream 8300   true Lsat_1_v8_lg_3: 46624863-46633162 Lactuca sativa
Lsat_1_v5_gn_3_34501 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 46628163-46633162 Lactuca sativa
Lsat_1_v5_gn_3_34501 10.0kb upstream 10.0kb upstream 13300   true Lsat_1_v8_lg_3: 46614863-46628162 Lactuca sativa
Lsat_1_v5_gn_3_34501 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 46614863-46624862 Lactuca sativa
Lsat_1_v5_gn_3_34501 10.0kb downstream 10.0kb downstream 13300   true Lsat_1_v8_lg_3: 46624863-46638162 Lactuca sativa
Lsat_1_v5_gn_3_34501 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 46628163-46638162 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481581 5263 Asterids View MSA
123747198 5271 Pentapetalae View MSA
122786778 5272 Eudicot View MSA
122048979 5273 Angiosperm View MSA
121347494 5274 Embryophyte View MSA
123425038 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain