Gene : Lsat_1_v5_gn_3_34220 L. sativa V8
Defline:  (1 of 7) PF12579 - Protein of unknown function (DUF3755) (DUF3755) Genomic Order:  1041
Name:  ? Lsat_1_v5_gn_3_34220 Secondary Identifier:  ? PAC:38919749
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_34220 0.5kb upstream 0.5kb upstream 4598   true Lsat_1_v8_lg_3: 43236047-43240644 Lactuca sativa
Lsat_1_v5_gn_3_34220 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 43240145-43240644 Lactuca sativa
Lsat_1_v5_gn_3_34220 0.5kb downstream 0.5kb downstream 4598   true Lsat_1_v8_lg_3: 43235547-43240144 Lactuca sativa
Lsat_1_v5_gn_3_34220 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 43235547-43236046 Lactuca sativa
Lsat_1_v5_gn_3_34220 1.0kb upstream 1.0kb upstream 5098   true Lsat_1_v8_lg_3: 43236047-43241144 Lactuca sativa
Lsat_1_v5_gn_3_34220 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 43240145-43241144 Lactuca sativa
Lsat_1_v5_gn_3_34220 1.0kb downstream 1.0kb downstream 5098   true Lsat_1_v8_lg_3: 43235047-43240144 Lactuca sativa
Lsat_1_v5_gn_3_34220 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 43235047-43236046 Lactuca sativa
Lsat_1_v5_gn_3_34220 2.0kb upstream 2.0kb upstream 6098   true Lsat_1_v8_lg_3: 43236047-43242144 Lactuca sativa
Lsat_1_v5_gn_3_34220 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 43240145-43242144 Lactuca sativa
Lsat_1_v5_gn_3_34220 2.0kb downstream 2.0kb downstream 6098   true Lsat_1_v8_lg_3: 43234047-43240144 Lactuca sativa
Lsat_1_v5_gn_3_34220 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 43234047-43236046 Lactuca sativa
Lsat_1_v5_gn_3_34220 5.0kb upstream 5.0kb upstream 9098   true Lsat_1_v8_lg_3: 43236047-43245144 Lactuca sativa
Lsat_1_v5_gn_3_34220 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 43240145-43245144 Lactuca sativa
Lsat_1_v5_gn_3_34220 5.0kb downstream 5.0kb downstream 9098   true Lsat_1_v8_lg_3: 43231047-43240144 Lactuca sativa
Lsat_1_v5_gn_3_34220 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 43231047-43236046 Lactuca sativa
Lsat_1_v5_gn_3_34220 10.0kb upstream 10.0kb upstream 14098   true Lsat_1_v8_lg_3: 43236047-43250144 Lactuca sativa
Lsat_1_v5_gn_3_34220 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 43240145-43250144 Lactuca sativa
Lsat_1_v5_gn_3_34220 10.0kb downstream 10.0kb downstream 14098   true Lsat_1_v8_lg_3: 43226047-43240144 Lactuca sativa
Lsat_1_v5_gn_3_34220 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 43226047-43236046 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478708 5263 Asterids View MSA
123751212 5271 Pentapetalae View MSA
122789009 5272 Eudicot View MSA
122047918 5273 Angiosperm View MSA
121349043 5274 Embryophyte View MSA
123381139 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain