Gene : Lsat_1_v5_gn_3_3420 L. sativa V8
Defline:  (1 of 1) PTHR12899:SF5 - RIBOSOMAL L18P/L5E FAMILY PROTEIN Genomic Order:  106
Name:  ? Lsat_1_v5_gn_3_3420 Secondary Identifier:  ? PAC:38920897
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_3420 0.5kb upstream 0.5kb upstream 1472   true Lsat_1_v8_lg_3: 6052455-6053926 Lactuca sativa
Lsat_1_v5_gn_3_3420 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 6053427-6053926 Lactuca sativa
Lsat_1_v5_gn_3_3420 0.5kb downstream 0.5kb downstream 1472   true Lsat_1_v8_lg_3: 6051955-6053426 Lactuca sativa
Lsat_1_v5_gn_3_3420 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 6051955-6052454 Lactuca sativa
Lsat_1_v5_gn_3_3420 1.0kb upstream 1.0kb upstream 1972   true Lsat_1_v8_lg_3: 6052455-6054426 Lactuca sativa
Lsat_1_v5_gn_3_3420 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 6053427-6054426 Lactuca sativa
Lsat_1_v5_gn_3_3420 1.0kb downstream 1.0kb downstream 1972   true Lsat_1_v8_lg_3: 6051455-6053426 Lactuca sativa
Lsat_1_v5_gn_3_3420 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 6051455-6052454 Lactuca sativa
Lsat_1_v5_gn_3_3420 2.0kb upstream 2.0kb upstream 2972   true Lsat_1_v8_lg_3: 6052455-6055426 Lactuca sativa
Lsat_1_v5_gn_3_3420 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 6053427-6055426 Lactuca sativa
Lsat_1_v5_gn_3_3420 2.0kb downstream 2.0kb downstream 2972   true Lsat_1_v8_lg_3: 6050455-6053426 Lactuca sativa
Lsat_1_v5_gn_3_3420 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 6050455-6052454 Lactuca sativa
Lsat_1_v5_gn_3_3420 5.0kb upstream 5.0kb upstream 5972   true Lsat_1_v8_lg_3: 6052455-6058426 Lactuca sativa
Lsat_1_v5_gn_3_3420 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 6053427-6058426 Lactuca sativa
Lsat_1_v5_gn_3_3420 5.0kb downstream 5.0kb downstream 5972   true Lsat_1_v8_lg_3: 6047455-6053426 Lactuca sativa
Lsat_1_v5_gn_3_3420 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 6047455-6052454 Lactuca sativa
Lsat_1_v5_gn_3_3420 10.0kb upstream 10.0kb upstream 10972   true Lsat_1_v8_lg_3: 6052455-6063426 Lactuca sativa
Lsat_1_v5_gn_3_3420 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 6053427-6063426 Lactuca sativa
Lsat_1_v5_gn_3_3420 10.0kb downstream 10.0kb downstream 10972   true Lsat_1_v8_lg_3: 6042455-6053426 Lactuca sativa
Lsat_1_v5_gn_3_3420 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 6042455-6052454 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470520 5263 Asterids View MSA
123738575 5271 Pentapetalae View MSA
122789251 5272 Eudicot View MSA
122043633 5273 Angiosperm View MSA
121351328 5274 Embryophyte View MSA
123382121 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain