Gene : Lsat_1_v5_gn_3_35581 L. sativa V8
Defline:  (1 of 1) PTHR10994//PTHR10994:SF62 - RETICULON // RETICULON-LIKE PROTEIN B8 Genomic Order:  1105
Name:  ? Lsat_1_v5_gn_3_35581 Secondary Identifier:  ? PAC:38920038
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_35581 0.5kb upstream 0.5kb upstream 3116   true Lsat_1_v8_lg_3: 45357067-45360182 Lactuca sativa
Lsat_1_v5_gn_3_35581 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 45357067-45357566 Lactuca sativa
Lsat_1_v5_gn_3_35581 0.5kb downstream 0.5kb downstream 3116   true Lsat_1_v8_lg_3: 45357567-45360682 Lactuca sativa
Lsat_1_v5_gn_3_35581 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 45360183-45360682 Lactuca sativa
Lsat_1_v5_gn_3_35581 1.0kb upstream 1.0kb upstream 3616   true Lsat_1_v8_lg_3: 45356567-45360182 Lactuca sativa
Lsat_1_v5_gn_3_35581 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 45356567-45357566 Lactuca sativa
Lsat_1_v5_gn_3_35581 1.0kb downstream 1.0kb downstream 3616   true Lsat_1_v8_lg_3: 45357567-45361182 Lactuca sativa
Lsat_1_v5_gn_3_35581 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 45360183-45361182 Lactuca sativa
Lsat_1_v5_gn_3_35581 2.0kb upstream 2.0kb upstream 4616   true Lsat_1_v8_lg_3: 45355567-45360182 Lactuca sativa
Lsat_1_v5_gn_3_35581 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 45355567-45357566 Lactuca sativa
Lsat_1_v5_gn_3_35581 2.0kb downstream 2.0kb downstream 4616   true Lsat_1_v8_lg_3: 45357567-45362182 Lactuca sativa
Lsat_1_v5_gn_3_35581 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 45360183-45362182 Lactuca sativa
Lsat_1_v5_gn_3_35581 5.0kb upstream 5.0kb upstream 7616   true Lsat_1_v8_lg_3: 45352567-45360182 Lactuca sativa
Lsat_1_v5_gn_3_35581 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 45352567-45357566 Lactuca sativa
Lsat_1_v5_gn_3_35581 5.0kb downstream 5.0kb downstream 7616   true Lsat_1_v8_lg_3: 45357567-45365182 Lactuca sativa
Lsat_1_v5_gn_3_35581 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 45360183-45365182 Lactuca sativa
Lsat_1_v5_gn_3_35581 10.0kb upstream 10.0kb upstream 12616   true Lsat_1_v8_lg_3: 45347567-45360182 Lactuca sativa
Lsat_1_v5_gn_3_35581 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 45347567-45357566 Lactuca sativa
Lsat_1_v5_gn_3_35581 10.0kb downstream 10.0kb downstream 12616   true Lsat_1_v8_lg_3: 45357567-45370182 Lactuca sativa
Lsat_1_v5_gn_3_35581 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 45360183-45370182 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480443 5263 Asterids View MSA
123740052 5271 Pentapetalae View MSA
122787995 5272 Eudicot View MSA
122045587 5273 Angiosperm View MSA
121310470 5274 Embryophyte View MSA
123347943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain