Gene : Lsat_1_v5_gn_3_39461 L. sativa V8
Defline:  (1 of 2) PTHR13832:SF193 - PROTEIN PHOSPHATASE 2C 1-RELATED Genomic Order:  1315
Name:  ? Lsat_1_v5_gn_3_39461 Secondary Identifier:  ? PAC:38920436
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_39461 0.5kb upstream 0.5kb upstream 3745   true Lsat_1_v8_lg_3: 52753970-52757714 Lactuca sativa
Lsat_1_v5_gn_3_39461 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 52757215-52757714 Lactuca sativa
Lsat_1_v5_gn_3_39461 0.5kb downstream 0.5kb downstream 3745   true Lsat_1_v8_lg_3: 52753470-52757214 Lactuca sativa
Lsat_1_v5_gn_3_39461 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 52753470-52753969 Lactuca sativa
Lsat_1_v5_gn_3_39461 1.0kb upstream 1.0kb upstream 4245   true Lsat_1_v8_lg_3: 52753970-52758214 Lactuca sativa
Lsat_1_v5_gn_3_39461 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 52757215-52758214 Lactuca sativa
Lsat_1_v5_gn_3_39461 1.0kb downstream 1.0kb downstream 4245   true Lsat_1_v8_lg_3: 52752970-52757214 Lactuca sativa
Lsat_1_v5_gn_3_39461 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 52752970-52753969 Lactuca sativa
Lsat_1_v5_gn_3_39461 2.0kb upstream 2.0kb upstream 5245   true Lsat_1_v8_lg_3: 52753970-52759214 Lactuca sativa
Lsat_1_v5_gn_3_39461 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 52757215-52759214 Lactuca sativa
Lsat_1_v5_gn_3_39461 2.0kb downstream 2.0kb downstream 5245   true Lsat_1_v8_lg_3: 52751970-52757214 Lactuca sativa
Lsat_1_v5_gn_3_39461 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 52751970-52753969 Lactuca sativa
Lsat_1_v5_gn_3_39461 5.0kb upstream 5.0kb upstream 8245   true Lsat_1_v8_lg_3: 52753970-52762214 Lactuca sativa
Lsat_1_v5_gn_3_39461 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 52757215-52762214 Lactuca sativa
Lsat_1_v5_gn_3_39461 5.0kb downstream 5.0kb downstream 8245   true Lsat_1_v8_lg_3: 52748970-52757214 Lactuca sativa
Lsat_1_v5_gn_3_39461 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 52748970-52753969 Lactuca sativa
Lsat_1_v5_gn_3_39461 10.0kb upstream 10.0kb upstream 13245   true Lsat_1_v8_lg_3: 52753970-52767214 Lactuca sativa
Lsat_1_v5_gn_3_39461 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 52757215-52767214 Lactuca sativa
Lsat_1_v5_gn_3_39461 10.0kb downstream 10.0kb downstream 13245   true Lsat_1_v8_lg_3: 52743970-52757214 Lactuca sativa
Lsat_1_v5_gn_3_39461 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 52743970-52753969 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027541 5273 Angiosperm View MSA
121472260 5263 Asterids View MSA
123739469 5271 Pentapetalae View MSA
122786449 5272 Eudicot View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain