Gene : Lsat_1_v5_gn_3_3920 L. sativa V8
Defline:  (1 of 1) K06980 - uncharacterized protein (K06980) Genomic Order:  88
Name:  ? Lsat_1_v5_gn_3_3920 Secondary Identifier:  ? PAC:38916748
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_3920 0.5kb upstream 0.5kb upstream 2884   true Lsat_1_v8_lg_3: 5491008-5493891 Lactuca sativa
Lsat_1_v5_gn_3_3920 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 5493392-5493891 Lactuca sativa
Lsat_1_v5_gn_3_3920 0.5kb downstream 0.5kb downstream 2884   true Lsat_1_v8_lg_3: 5490508-5493391 Lactuca sativa
Lsat_1_v5_gn_3_3920 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 5490508-5491007 Lactuca sativa
Lsat_1_v5_gn_3_3920 1.0kb upstream 1.0kb upstream 3384   true Lsat_1_v8_lg_3: 5491008-5494391 Lactuca sativa
Lsat_1_v5_gn_3_3920 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 5493392-5494391 Lactuca sativa
Lsat_1_v5_gn_3_3920 1.0kb downstream 1.0kb downstream 3384   true Lsat_1_v8_lg_3: 5490008-5493391 Lactuca sativa
Lsat_1_v5_gn_3_3920 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 5490008-5491007 Lactuca sativa
Lsat_1_v5_gn_3_3920 2.0kb upstream 2.0kb upstream 4384   true Lsat_1_v8_lg_3: 5491008-5495391 Lactuca sativa
Lsat_1_v5_gn_3_3920 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 5493392-5495391 Lactuca sativa
Lsat_1_v5_gn_3_3920 2.0kb downstream 2.0kb downstream 4384   true Lsat_1_v8_lg_3: 5489008-5493391 Lactuca sativa
Lsat_1_v5_gn_3_3920 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 5489008-5491007 Lactuca sativa
Lsat_1_v5_gn_3_3920 5.0kb upstream 5.0kb upstream 7384   true Lsat_1_v8_lg_3: 5491008-5498391 Lactuca sativa
Lsat_1_v5_gn_3_3920 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 5493392-5498391 Lactuca sativa
Lsat_1_v5_gn_3_3920 5.0kb downstream 5.0kb downstream 7384   true Lsat_1_v8_lg_3: 5486008-5493391 Lactuca sativa
Lsat_1_v5_gn_3_3920 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 5486008-5491007 Lactuca sativa
Lsat_1_v5_gn_3_3920 10.0kb upstream 10.0kb upstream 12384   true Lsat_1_v8_lg_3: 5491008-5503391 Lactuca sativa
Lsat_1_v5_gn_3_3920 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 5493392-5503391 Lactuca sativa
Lsat_1_v5_gn_3_3920 10.0kb downstream 10.0kb downstream 12384   true Lsat_1_v8_lg_3: 5481008-5493391 Lactuca sativa
Lsat_1_v5_gn_3_3920 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 5481008-5491007 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478178 5263 Asterids View MSA
123745286 5271 Pentapetalae View MSA
122786826 5272 Eudicot View MSA
122047678 5273 Angiosperm View MSA
121345221 5274 Embryophyte View MSA
123428171 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain