Gene : Lsat_1_v5_gn_3_39001 L. sativa V8
Defline:  (1 of 9) PTHR11404//PTHR11404:SF6 - SUPEROXIDE DISMUTASE 2 // SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL Genomic Order:  1253
Name:  ? Lsat_1_v5_gn_3_39001 Secondary Identifier:  ? PAC:38916116
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa DETOX1-PWY Lactuca sativa pathologic  
Lsativa DETOX1-PWY-1 Lactuca sativa pathologic  
Lsativa PWY-6854 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_39001 0.5kb upstream 0.5kb upstream 2024   true Lsat_1_v8_lg_3: 50660521-50662544 Lactuca sativa
Lsat_1_v5_gn_3_39001 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 50662045-50662544 Lactuca sativa
Lsat_1_v5_gn_3_39001 0.5kb downstream 0.5kb downstream 2024   true Lsat_1_v8_lg_3: 50660021-50662044 Lactuca sativa
Lsat_1_v5_gn_3_39001 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 50660021-50660520 Lactuca sativa
Lsat_1_v5_gn_3_39001 1.0kb upstream 1.0kb upstream 2524   true Lsat_1_v8_lg_3: 50660521-50663044 Lactuca sativa
Lsat_1_v5_gn_3_39001 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 50662045-50663044 Lactuca sativa
Lsat_1_v5_gn_3_39001 1.0kb downstream 1.0kb downstream 2524   true Lsat_1_v8_lg_3: 50659521-50662044 Lactuca sativa
Lsat_1_v5_gn_3_39001 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 50659521-50660520 Lactuca sativa
Lsat_1_v5_gn_3_39001 2.0kb upstream 2.0kb upstream 3524   true Lsat_1_v8_lg_3: 50660521-50664044 Lactuca sativa
Lsat_1_v5_gn_3_39001 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 50662045-50664044 Lactuca sativa
Lsat_1_v5_gn_3_39001 2.0kb downstream 2.0kb downstream 3524   true Lsat_1_v8_lg_3: 50658521-50662044 Lactuca sativa
Lsat_1_v5_gn_3_39001 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 50658521-50660520 Lactuca sativa
Lsat_1_v5_gn_3_39001 5.0kb upstream 5.0kb upstream 6524   true Lsat_1_v8_lg_3: 50660521-50667044 Lactuca sativa
Lsat_1_v5_gn_3_39001 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 50662045-50667044 Lactuca sativa
Lsat_1_v5_gn_3_39001 5.0kb downstream 5.0kb downstream 6524   true Lsat_1_v8_lg_3: 50655521-50662044 Lactuca sativa
Lsat_1_v5_gn_3_39001 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 50655521-50660520 Lactuca sativa
Lsat_1_v5_gn_3_39001 10.0kb upstream 10.0kb upstream 11524   true Lsat_1_v8_lg_3: 50660521-50672044 Lactuca sativa
Lsat_1_v5_gn_3_39001 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 50662045-50672044 Lactuca sativa
Lsat_1_v5_gn_3_39001 10.0kb downstream 10.0kb downstream 11524   true Lsat_1_v8_lg_3: 50650521-50662044 Lactuca sativa
Lsat_1_v5_gn_3_39001 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 50650521-50660520 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121442751 5263 Asterids Singleton cluster - no MSA
123756119 5271 Pentapetalae View MSA
122777297 5272 Eudicot View MSA
122050195 5273 Angiosperm View MSA
121345064 5274 Embryophyte View MSA
123426666 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain