Gene : Lsat_1_v5_gn_3_39381 L. sativa V8
Defline:  (1 of 1) PTHR31901:SF10 - AUXIN-RESPONSIVE GH3 FAMILY PROTEIN Genomic Order:  1312
Name:  ? Lsat_1_v5_gn_3_39381 Secondary Identifier:  ? PAC:38920116
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_39381 0.5kb upstream 0.5kb upstream 10900   true Lsat_1_v8_lg_3: 52519037-52529936 Lactuca sativa
Lsat_1_v5_gn_3_39381 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 52529437-52529936 Lactuca sativa
Lsat_1_v5_gn_3_39381 0.5kb downstream 0.5kb downstream 10900   true Lsat_1_v8_lg_3: 52518537-52529436 Lactuca sativa
Lsat_1_v5_gn_3_39381 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 52518537-52519036 Lactuca sativa
Lsat_1_v5_gn_3_39381 1.0kb upstream 1.0kb upstream 11400   true Lsat_1_v8_lg_3: 52519037-52530436 Lactuca sativa
Lsat_1_v5_gn_3_39381 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 52529437-52530436 Lactuca sativa
Lsat_1_v5_gn_3_39381 1.0kb downstream 1.0kb downstream 11400   true Lsat_1_v8_lg_3: 52518037-52529436 Lactuca sativa
Lsat_1_v5_gn_3_39381 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 52518037-52519036 Lactuca sativa
Lsat_1_v5_gn_3_39381 2.0kb upstream 2.0kb upstream 12400   true Lsat_1_v8_lg_3: 52519037-52531436 Lactuca sativa
Lsat_1_v5_gn_3_39381 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 52529437-52531436 Lactuca sativa
Lsat_1_v5_gn_3_39381 2.0kb downstream 2.0kb downstream 12400   true Lsat_1_v8_lg_3: 52517037-52529436 Lactuca sativa
Lsat_1_v5_gn_3_39381 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 52517037-52519036 Lactuca sativa
Lsat_1_v5_gn_3_39381 5.0kb upstream 5.0kb upstream 15400   true Lsat_1_v8_lg_3: 52519037-52534436 Lactuca sativa
Lsat_1_v5_gn_3_39381 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 52529437-52534436 Lactuca sativa
Lsat_1_v5_gn_3_39381 5.0kb downstream 5.0kb downstream 15400   true Lsat_1_v8_lg_3: 52514037-52529436 Lactuca sativa
Lsat_1_v5_gn_3_39381 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 52514037-52519036 Lactuca sativa
Lsat_1_v5_gn_3_39381 10.0kb upstream 10.0kb upstream 20400   true Lsat_1_v8_lg_3: 52519037-52539436 Lactuca sativa
Lsat_1_v5_gn_3_39381 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 52529437-52539436 Lactuca sativa
Lsat_1_v5_gn_3_39381 10.0kb downstream 10.0kb downstream 20400   true Lsat_1_v8_lg_3: 52509037-52529436 Lactuca sativa
Lsat_1_v5_gn_3_39381 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 52509037-52519036 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473991 5263 Asterids View MSA
123750974 5271 Pentapetalae View MSA
122788178 5272 Eudicot View MSA
122044155 5273 Angiosperm View MSA
121349637 5274 Embryophyte View MSA
123381383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain