Gene : Lsat_1_v5_gn_3_39261 L. sativa V8
Defline:  (1 of 3) PTHR34053//PTHR34053:SF1 - FAMILY NOT NAMED // PROTEIN ULTRAPETALA 1-RELATED Genomic Order:  1307
Name:  ? Lsat_1_v5_gn_3_39261 Secondary Identifier:  ? PAC:38917154
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_39261 0.5kb upstream 0.5kb upstream 2596   true Lsat_1_v8_lg_3: 52418762-52421357 Lactuca sativa
Lsat_1_v5_gn_3_39261 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 52420858-52421357 Lactuca sativa
Lsat_1_v5_gn_3_39261 0.5kb downstream 0.5kb downstream 2596   true Lsat_1_v8_lg_3: 52418262-52420857 Lactuca sativa
Lsat_1_v5_gn_3_39261 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 52418262-52418761 Lactuca sativa
Lsat_1_v5_gn_3_39261 1.0kb upstream 1.0kb upstream 3096   true Lsat_1_v8_lg_3: 52418762-52421857 Lactuca sativa
Lsat_1_v5_gn_3_39261 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 52420858-52421857 Lactuca sativa
Lsat_1_v5_gn_3_39261 1.0kb downstream 1.0kb downstream 3096   true Lsat_1_v8_lg_3: 52417762-52420857 Lactuca sativa
Lsat_1_v5_gn_3_39261 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 52417762-52418761 Lactuca sativa
Lsat_1_v5_gn_3_39261 2.0kb upstream 2.0kb upstream 4096   true Lsat_1_v8_lg_3: 52418762-52422857 Lactuca sativa
Lsat_1_v5_gn_3_39261 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 52420858-52422857 Lactuca sativa
Lsat_1_v5_gn_3_39261 2.0kb downstream 2.0kb downstream 4096   true Lsat_1_v8_lg_3: 52416762-52420857 Lactuca sativa
Lsat_1_v5_gn_3_39261 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 52416762-52418761 Lactuca sativa
Lsat_1_v5_gn_3_39261 5.0kb upstream 5.0kb upstream 7096   true Lsat_1_v8_lg_3: 52418762-52425857 Lactuca sativa
Lsat_1_v5_gn_3_39261 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 52420858-52425857 Lactuca sativa
Lsat_1_v5_gn_3_39261 5.0kb downstream 5.0kb downstream 7096   true Lsat_1_v8_lg_3: 52413762-52420857 Lactuca sativa
Lsat_1_v5_gn_3_39261 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 52413762-52418761 Lactuca sativa
Lsat_1_v5_gn_3_39261 10.0kb upstream 10.0kb upstream 12096   true Lsat_1_v8_lg_3: 52418762-52430857 Lactuca sativa
Lsat_1_v5_gn_3_39261 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 52420858-52430857 Lactuca sativa
Lsat_1_v5_gn_3_39261 10.0kb downstream 10.0kb downstream 12096   true Lsat_1_v8_lg_3: 52408762-52420857 Lactuca sativa
Lsat_1_v5_gn_3_39261 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 52408762-52418761 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121452222 5263 Asterids View MSA
123743766 5271 Pentapetalae View MSA
122795769 5272 Eudicot View MSA
122043441 5273 Angiosperm View MSA
121310126 5274 Embryophyte View MSA
123347700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain