Gene : Lsat_1_v5_gn_3_43840 L. sativa V8
Defline:  (1 of 15) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  1415
Name:  ? Lsat_1_v5_gn_3_43840 Secondary Identifier:  ? PAC:38921054
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_43840 0.5kb upstream 0.5kb upstream 2017   true Lsat_1_v8_lg_3: 56337127-56339143 Lactuca sativa
Lsat_1_v5_gn_3_43840 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 56338644-56339143 Lactuca sativa
Lsat_1_v5_gn_3_43840 0.5kb downstream 0.5kb downstream 2017   true Lsat_1_v8_lg_3: 56336627-56338643 Lactuca sativa
Lsat_1_v5_gn_3_43840 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 56336627-56337126 Lactuca sativa
Lsat_1_v5_gn_3_43840 1.0kb upstream 1.0kb upstream 2517   true Lsat_1_v8_lg_3: 56337127-56339643 Lactuca sativa
Lsat_1_v5_gn_3_43840 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 56338644-56339643 Lactuca sativa
Lsat_1_v5_gn_3_43840 1.0kb downstream 1.0kb downstream 2517   true Lsat_1_v8_lg_3: 56336127-56338643 Lactuca sativa
Lsat_1_v5_gn_3_43840 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 56336127-56337126 Lactuca sativa
Lsat_1_v5_gn_3_43840 2.0kb upstream 2.0kb upstream 3517   true Lsat_1_v8_lg_3: 56337127-56340643 Lactuca sativa
Lsat_1_v5_gn_3_43840 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 56338644-56340643 Lactuca sativa
Lsat_1_v5_gn_3_43840 2.0kb downstream 2.0kb downstream 3517   true Lsat_1_v8_lg_3: 56335127-56338643 Lactuca sativa
Lsat_1_v5_gn_3_43840 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 56335127-56337126 Lactuca sativa
Lsat_1_v5_gn_3_43840 5.0kb upstream 5.0kb upstream 6517   true Lsat_1_v8_lg_3: 56337127-56343643 Lactuca sativa
Lsat_1_v5_gn_3_43840 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 56338644-56343643 Lactuca sativa
Lsat_1_v5_gn_3_43840 5.0kb downstream 5.0kb downstream 6517   true Lsat_1_v8_lg_3: 56332127-56338643 Lactuca sativa
Lsat_1_v5_gn_3_43840 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 56332127-56337126 Lactuca sativa
Lsat_1_v5_gn_3_43840 10.0kb upstream 10.0kb upstream 11517   true Lsat_1_v8_lg_3: 56337127-56348643 Lactuca sativa
Lsat_1_v5_gn_3_43840 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 56338644-56348643 Lactuca sativa
Lsat_1_v5_gn_3_43840 10.0kb downstream 10.0kb downstream 11517   true Lsat_1_v8_lg_3: 56327127-56338643 Lactuca sativa
Lsat_1_v5_gn_3_43840 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 56327127-56337126 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471078 5263 Asterids View MSA
123746466 5271 Pentapetalae View MSA
122797152 5272 Eudicot View MSA
122048974 5273 Angiosperm View MSA
121311194 5274 Embryophyte View MSA
123348523 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain