Gene : Lsat_1_v5_gn_3_45480 L. sativa V8
Defline:  (1 of 3) PTHR10585:SF34 - ER LUMEN PROTEIN RETAINING RECEPTOR-LIKE PROTEIN Genomic Order:  1459
Name:  ? Lsat_1_v5_gn_3_45480 Secondary Identifier:  ? PAC:38919395
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_45480 0.5kb upstream 0.5kb upstream 2418   true Lsat_1_v8_lg_3: 58268924-58271341 Lactuca sativa
Lsat_1_v5_gn_3_45480 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 58270842-58271341 Lactuca sativa
Lsat_1_v5_gn_3_45480 0.5kb downstream 0.5kb downstream 2418   true Lsat_1_v8_lg_3: 58268424-58270841 Lactuca sativa
Lsat_1_v5_gn_3_45480 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 58268424-58268923 Lactuca sativa
Lsat_1_v5_gn_3_45480 1.0kb upstream 1.0kb upstream 2918   true Lsat_1_v8_lg_3: 58268924-58271841 Lactuca sativa
Lsat_1_v5_gn_3_45480 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 58270842-58271841 Lactuca sativa
Lsat_1_v5_gn_3_45480 1.0kb downstream 1.0kb downstream 2918   true Lsat_1_v8_lg_3: 58267924-58270841 Lactuca sativa
Lsat_1_v5_gn_3_45480 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 58267924-58268923 Lactuca sativa
Lsat_1_v5_gn_3_45480 2.0kb upstream 2.0kb upstream 3918   true Lsat_1_v8_lg_3: 58268924-58272841 Lactuca sativa
Lsat_1_v5_gn_3_45480 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 58270842-58272841 Lactuca sativa
Lsat_1_v5_gn_3_45480 2.0kb downstream 2.0kb downstream 3918   true Lsat_1_v8_lg_3: 58266924-58270841 Lactuca sativa
Lsat_1_v5_gn_3_45480 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 58266924-58268923 Lactuca sativa
Lsat_1_v5_gn_3_45480 5.0kb upstream 5.0kb upstream 6918   true Lsat_1_v8_lg_3: 58268924-58275841 Lactuca sativa
Lsat_1_v5_gn_3_45480 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 58270842-58275841 Lactuca sativa
Lsat_1_v5_gn_3_45480 5.0kb downstream 5.0kb downstream 6918   true Lsat_1_v8_lg_3: 58263924-58270841 Lactuca sativa
Lsat_1_v5_gn_3_45480 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 58263924-58268923 Lactuca sativa
Lsat_1_v5_gn_3_45480 10.0kb upstream 10.0kb upstream 11918   true Lsat_1_v8_lg_3: 58268924-58280841 Lactuca sativa
Lsat_1_v5_gn_3_45480 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 58270842-58280841 Lactuca sativa
Lsat_1_v5_gn_3_45480 10.0kb downstream 10.0kb downstream 11918   true Lsat_1_v8_lg_3: 58258924-58270841 Lactuca sativa
Lsat_1_v5_gn_3_45480 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 58258924-58268923 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481959 5263 Asterids View MSA
123748008 5271 Pentapetalae View MSA
122789201 5272 Eudicot View MSA
122049823 5273 Angiosperm View MSA
121349491 5274 Embryophyte View MSA
123426417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain