Gene : Lsat_1_v5_gn_3_45501 L. sativa V8
Defline:  (1 of 2) PTHR11877//PTHR11877:SF25 - HYDROXYMETHYLGLUTARYL-COA SYNTHASE // SUBFAMILY NOT NAMED Genomic Order:  1458
Name:  ? Lsat_1_v5_gn_3_45501 Secondary Identifier:  ? PAC:38915325
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_45501 0.5kb upstream 0.5kb upstream 1987   true Lsat_1_v8_lg_3: 58266720-58268706 Lactuca sativa
Lsat_1_v5_gn_3_45501 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 58266720-58267219 Lactuca sativa
Lsat_1_v5_gn_3_45501 0.5kb downstream 0.5kb downstream 1987   true Lsat_1_v8_lg_3: 58267220-58269206 Lactuca sativa
Lsat_1_v5_gn_3_45501 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 58268707-58269206 Lactuca sativa
Lsat_1_v5_gn_3_45501 1.0kb upstream 1.0kb upstream 2487   true Lsat_1_v8_lg_3: 58266220-58268706 Lactuca sativa
Lsat_1_v5_gn_3_45501 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 58266220-58267219 Lactuca sativa
Lsat_1_v5_gn_3_45501 1.0kb downstream 1.0kb downstream 2487   true Lsat_1_v8_lg_3: 58267220-58269706 Lactuca sativa
Lsat_1_v5_gn_3_45501 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 58268707-58269706 Lactuca sativa
Lsat_1_v5_gn_3_45501 2.0kb upstream 2.0kb upstream 3487   true Lsat_1_v8_lg_3: 58265220-58268706 Lactuca sativa
Lsat_1_v5_gn_3_45501 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 58265220-58267219 Lactuca sativa
Lsat_1_v5_gn_3_45501 2.0kb downstream 2.0kb downstream 3487   true Lsat_1_v8_lg_3: 58267220-58270706 Lactuca sativa
Lsat_1_v5_gn_3_45501 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 58268707-58270706 Lactuca sativa
Lsat_1_v5_gn_3_45501 5.0kb upstream 5.0kb upstream 6487   true Lsat_1_v8_lg_3: 58262220-58268706 Lactuca sativa
Lsat_1_v5_gn_3_45501 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 58262220-58267219 Lactuca sativa
Lsat_1_v5_gn_3_45501 5.0kb downstream 5.0kb downstream 6487   true Lsat_1_v8_lg_3: 58267220-58273706 Lactuca sativa
Lsat_1_v5_gn_3_45501 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 58268707-58273706 Lactuca sativa
Lsat_1_v5_gn_3_45501 10.0kb upstream 10.0kb upstream 11487   true Lsat_1_v8_lg_3: 58257220-58268706 Lactuca sativa
Lsat_1_v5_gn_3_45501 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 58257220-58267219 Lactuca sativa
Lsat_1_v5_gn_3_45501 10.0kb downstream 10.0kb downstream 11487   true Lsat_1_v8_lg_3: 58267220-58278706 Lactuca sativa
Lsat_1_v5_gn_3_45501 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 58268707-58278706 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466855 5263 Asterids View MSA
123736714 5271 Pentapetalae View MSA
122788702 5272 Eudicot View MSA
122042999 5273 Angiosperm View MSA
121348952 5274 Embryophyte View MSA
123428386 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain