Gene : Lsat_1_v5_gn_3_4560 L. sativa V8
Defline:  (1 of 1) PTHR12357//PTHR12357:SF32 - YTH YT521-B HOMOLOGY DOMAIN-CONTAINING // YTH FAMILY PROTEIN Genomic Order:  136
Name:  ? Lsat_1_v5_gn_3_4560 Secondary Identifier:  ? PAC:38920795
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_4560 0.5kb upstream 0.5kb upstream 8736   true Lsat_1_v8_lg_3: 7349452-7358187 Lactuca sativa
Lsat_1_v5_gn_3_4560 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 7357688-7358187 Lactuca sativa
Lsat_1_v5_gn_3_4560 0.5kb downstream 0.5kb downstream 8736   true Lsat_1_v8_lg_3: 7348952-7357687 Lactuca sativa
Lsat_1_v5_gn_3_4560 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 7348952-7349451 Lactuca sativa
Lsat_1_v5_gn_3_4560 1.0kb upstream 1.0kb upstream 9236   true Lsat_1_v8_lg_3: 7349452-7358687 Lactuca sativa
Lsat_1_v5_gn_3_4560 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 7357688-7358687 Lactuca sativa
Lsat_1_v5_gn_3_4560 1.0kb downstream 1.0kb downstream 9236   true Lsat_1_v8_lg_3: 7348452-7357687 Lactuca sativa
Lsat_1_v5_gn_3_4560 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 7348452-7349451 Lactuca sativa
Lsat_1_v5_gn_3_4560 2.0kb upstream 2.0kb upstream 10236   true Lsat_1_v8_lg_3: 7349452-7359687 Lactuca sativa
Lsat_1_v5_gn_3_4560 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 7357688-7359687 Lactuca sativa
Lsat_1_v5_gn_3_4560 2.0kb downstream 2.0kb downstream 10236   true Lsat_1_v8_lg_3: 7347452-7357687 Lactuca sativa
Lsat_1_v5_gn_3_4560 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 7347452-7349451 Lactuca sativa
Lsat_1_v5_gn_3_4560 5.0kb upstream 5.0kb upstream 13236   true Lsat_1_v8_lg_3: 7349452-7362687 Lactuca sativa
Lsat_1_v5_gn_3_4560 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 7357688-7362687 Lactuca sativa
Lsat_1_v5_gn_3_4560 5.0kb downstream 5.0kb downstream 13236   true Lsat_1_v8_lg_3: 7344452-7357687 Lactuca sativa
Lsat_1_v5_gn_3_4560 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 7344452-7349451 Lactuca sativa
Lsat_1_v5_gn_3_4560 10.0kb upstream 10.0kb upstream 18236   true Lsat_1_v8_lg_3: 7349452-7367687 Lactuca sativa
Lsat_1_v5_gn_3_4560 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 7357688-7367687 Lactuca sativa
Lsat_1_v5_gn_3_4560 10.0kb downstream 10.0kb downstream 18236   true Lsat_1_v8_lg_3: 7339452-7357687 Lactuca sativa
Lsat_1_v5_gn_3_4560 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 7339452-7349451 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472517 5263 Asterids View MSA
123739575 5271 Pentapetalae View MSA
122769957 5272 Eudicot View MSA
122045860 5273 Angiosperm View MSA
121348539 5274 Embryophyte View MSA
123380904 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain