Gene : Lsat_1_v5_gn_3_44620 L. sativa V8
Defline:  (1 of 12) PTHR13690//PTHR13690:SF76 - FAMILY NOT NAMED // BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  1441
Name:  ? Lsat_1_v5_gn_3_44620 Secondary Identifier:  ? PAC:38920910
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_44620 0.5kb upstream 0.5kb upstream 3779   true Lsat_1_v8_lg_3: 57377207-57380985 Lactuca sativa
Lsat_1_v5_gn_3_44620 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 57380486-57380985 Lactuca sativa
Lsat_1_v5_gn_3_44620 0.5kb downstream 0.5kb downstream 3779   true Lsat_1_v8_lg_3: 57376707-57380485 Lactuca sativa
Lsat_1_v5_gn_3_44620 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 57376707-57377206 Lactuca sativa
Lsat_1_v5_gn_3_44620 1.0kb upstream 1.0kb upstream 4279   true Lsat_1_v8_lg_3: 57377207-57381485 Lactuca sativa
Lsat_1_v5_gn_3_44620 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 57380486-57381485 Lactuca sativa
Lsat_1_v5_gn_3_44620 1.0kb downstream 1.0kb downstream 4279   true Lsat_1_v8_lg_3: 57376207-57380485 Lactuca sativa
Lsat_1_v5_gn_3_44620 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 57376207-57377206 Lactuca sativa
Lsat_1_v5_gn_3_44620 2.0kb upstream 2.0kb upstream 5279   true Lsat_1_v8_lg_3: 57377207-57382485 Lactuca sativa
Lsat_1_v5_gn_3_44620 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 57380486-57382485 Lactuca sativa
Lsat_1_v5_gn_3_44620 2.0kb downstream 2.0kb downstream 5279   true Lsat_1_v8_lg_3: 57375207-57380485 Lactuca sativa
Lsat_1_v5_gn_3_44620 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 57375207-57377206 Lactuca sativa
Lsat_1_v5_gn_3_44620 5.0kb upstream 5.0kb upstream 8279   true Lsat_1_v8_lg_3: 57377207-57385485 Lactuca sativa
Lsat_1_v5_gn_3_44620 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 57380486-57385485 Lactuca sativa
Lsat_1_v5_gn_3_44620 5.0kb downstream 5.0kb downstream 8279   true Lsat_1_v8_lg_3: 57372207-57380485 Lactuca sativa
Lsat_1_v5_gn_3_44620 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 57372207-57377206 Lactuca sativa
Lsat_1_v5_gn_3_44620 10.0kb upstream 10.0kb upstream 13279   true Lsat_1_v8_lg_3: 57377207-57390485 Lactuca sativa
Lsat_1_v5_gn_3_44620 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 57380486-57390485 Lactuca sativa
Lsat_1_v5_gn_3_44620 10.0kb downstream 10.0kb downstream 13279   true Lsat_1_v8_lg_3: 57367207-57380485 Lactuca sativa
Lsat_1_v5_gn_3_44620 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 57367207-57377206 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475527 5263 Asterids View MSA
123743567 5271 Pentapetalae View MSA
122796613 5272 Eudicot View MSA
122046489 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121310613 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain