Gene : Lsat_1_v5_gn_3_47561 L. sativa V8
Defline:  (1 of 4) PF11833 - Protein of unknown function (DUF3353) (DUF3353) Genomic Order:  1506
Name:  ? Lsat_1_v5_gn_3_47561 Secondary Identifier:  ? PAC:38917619
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_47561 0.5kb upstream 0.5kb upstream 3687   true Lsat_1_v8_lg_3: 60162270-60165956 Lactuca sativa
Lsat_1_v5_gn_3_47561 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 60162270-60162769 Lactuca sativa
Lsat_1_v5_gn_3_47561 0.5kb downstream 0.5kb downstream 3687   true Lsat_1_v8_lg_3: 60162770-60166456 Lactuca sativa
Lsat_1_v5_gn_3_47561 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 60165957-60166456 Lactuca sativa
Lsat_1_v5_gn_3_47561 1.0kb upstream 1.0kb upstream 4187   true Lsat_1_v8_lg_3: 60161770-60165956 Lactuca sativa
Lsat_1_v5_gn_3_47561 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 60161770-60162769 Lactuca sativa
Lsat_1_v5_gn_3_47561 1.0kb downstream 1.0kb downstream 4187   true Lsat_1_v8_lg_3: 60162770-60166956 Lactuca sativa
Lsat_1_v5_gn_3_47561 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 60165957-60166956 Lactuca sativa
Lsat_1_v5_gn_3_47561 2.0kb upstream 2.0kb upstream 5187   true Lsat_1_v8_lg_3: 60160770-60165956 Lactuca sativa
Lsat_1_v5_gn_3_47561 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 60160770-60162769 Lactuca sativa
Lsat_1_v5_gn_3_47561 2.0kb downstream 2.0kb downstream 5187   true Lsat_1_v8_lg_3: 60162770-60167956 Lactuca sativa
Lsat_1_v5_gn_3_47561 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 60165957-60167956 Lactuca sativa
Lsat_1_v5_gn_3_47561 5.0kb upstream 5.0kb upstream 8187   true Lsat_1_v8_lg_3: 60157770-60165956 Lactuca sativa
Lsat_1_v5_gn_3_47561 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 60157770-60162769 Lactuca sativa
Lsat_1_v5_gn_3_47561 5.0kb downstream 5.0kb downstream 8187   true Lsat_1_v8_lg_3: 60162770-60170956 Lactuca sativa
Lsat_1_v5_gn_3_47561 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 60165957-60170956 Lactuca sativa
Lsat_1_v5_gn_3_47561 10.0kb upstream 10.0kb upstream 13187   true Lsat_1_v8_lg_3: 60152770-60165956 Lactuca sativa
Lsat_1_v5_gn_3_47561 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 60152770-60162769 Lactuca sativa
Lsat_1_v5_gn_3_47561 10.0kb downstream 10.0kb downstream 13187   true Lsat_1_v8_lg_3: 60162770-60175956 Lactuca sativa
Lsat_1_v5_gn_3_47561 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 60165957-60175956 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473232 5263 Asterids View MSA
123749118 5271 Pentapetalae View MSA
122786274 5272 Eudicot View MSA
122047398 5273 Angiosperm View MSA
121344434 5274 Embryophyte View MSA
123428691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain