Gene : Lsat_1_v5_gn_3_47360 L. sativa V8
Defline:  (1 of 2) PTHR31618//PTHR31618:SF1 - FAMILY NOT NAMED // MECHANOSENSITIVE ION CHANNEL PROTEIN 6-RELATED Genomic Order:  1512
Name:  ? Lsat_1_v5_gn_3_47360 Secondary Identifier:  ? PAC:38919155
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_47360 0.5kb upstream 0.5kb upstream 3488   true Lsat_1_v8_lg_3: 60261121-60264608 Lactuca sativa
Lsat_1_v5_gn_3_47360 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 60264109-60264608 Lactuca sativa
Lsat_1_v5_gn_3_47360 0.5kb downstream 0.5kb downstream 3488   true Lsat_1_v8_lg_3: 60260621-60264108 Lactuca sativa
Lsat_1_v5_gn_3_47360 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 60260621-60261120 Lactuca sativa
Lsat_1_v5_gn_3_47360 1.0kb upstream 1.0kb upstream 3988   true Lsat_1_v8_lg_3: 60261121-60265108 Lactuca sativa
Lsat_1_v5_gn_3_47360 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 60264109-60265108 Lactuca sativa
Lsat_1_v5_gn_3_47360 1.0kb downstream 1.0kb downstream 3988   true Lsat_1_v8_lg_3: 60260121-60264108 Lactuca sativa
Lsat_1_v5_gn_3_47360 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 60260121-60261120 Lactuca sativa
Lsat_1_v5_gn_3_47360 2.0kb upstream 2.0kb upstream 4988   true Lsat_1_v8_lg_3: 60261121-60266108 Lactuca sativa
Lsat_1_v5_gn_3_47360 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 60264109-60266108 Lactuca sativa
Lsat_1_v5_gn_3_47360 2.0kb downstream 2.0kb downstream 4988   true Lsat_1_v8_lg_3: 60259121-60264108 Lactuca sativa
Lsat_1_v5_gn_3_47360 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 60259121-60261120 Lactuca sativa
Lsat_1_v5_gn_3_47360 5.0kb upstream 5.0kb upstream 7988   true Lsat_1_v8_lg_3: 60261121-60269108 Lactuca sativa
Lsat_1_v5_gn_3_47360 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 60264109-60269108 Lactuca sativa
Lsat_1_v5_gn_3_47360 5.0kb downstream 5.0kb downstream 7988   true Lsat_1_v8_lg_3: 60256121-60264108 Lactuca sativa
Lsat_1_v5_gn_3_47360 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 60256121-60261120 Lactuca sativa
Lsat_1_v5_gn_3_47360 10.0kb upstream 10.0kb upstream 12988   true Lsat_1_v8_lg_3: 60261121-60274108 Lactuca sativa
Lsat_1_v5_gn_3_47360 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 60264109-60274108 Lactuca sativa
Lsat_1_v5_gn_3_47360 10.0kb downstream 10.0kb downstream 12988   true Lsat_1_v8_lg_3: 60251121-60264108 Lactuca sativa
Lsat_1_v5_gn_3_47360 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 60251121-60261120 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476509 5263 Asterids View MSA
123745809 5271 Pentapetalae View MSA
122795005 5272 Eudicot View MSA
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain