Gene : Lsat_1_v5_gn_3_46320 L. sativa V8
Defline:  (1 of 10) PF06911 - Senescence-associated protein (Senescence) Genomic Order:  1485
Name:  ? Lsat_1_v5_gn_3_46320 Secondary Identifier:  ? PAC:38916956
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_46320 0.5kb upstream 0.5kb upstream 2275   true Lsat_1_v8_lg_3: 58974133-58976407 Lactuca sativa
Lsat_1_v5_gn_3_46320 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 58974133-58974632 Lactuca sativa
Lsat_1_v5_gn_3_46320 0.5kb downstream 0.5kb downstream 2275   true Lsat_1_v8_lg_3: 58974633-58976907 Lactuca sativa
Lsat_1_v5_gn_3_46320 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 58976408-58976907 Lactuca sativa
Lsat_1_v5_gn_3_46320 1.0kb upstream 1.0kb upstream 2775   true Lsat_1_v8_lg_3: 58973633-58976407 Lactuca sativa
Lsat_1_v5_gn_3_46320 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 58973633-58974632 Lactuca sativa
Lsat_1_v5_gn_3_46320 1.0kb downstream 1.0kb downstream 2775   true Lsat_1_v8_lg_3: 58974633-58977407 Lactuca sativa
Lsat_1_v5_gn_3_46320 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 58976408-58977407 Lactuca sativa
Lsat_1_v5_gn_3_46320 2.0kb upstream 2.0kb upstream 3775   true Lsat_1_v8_lg_3: 58972633-58976407 Lactuca sativa
Lsat_1_v5_gn_3_46320 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 58972633-58974632 Lactuca sativa
Lsat_1_v5_gn_3_46320 2.0kb downstream 2.0kb downstream 3775   true Lsat_1_v8_lg_3: 58974633-58978407 Lactuca sativa
Lsat_1_v5_gn_3_46320 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 58976408-58978407 Lactuca sativa
Lsat_1_v5_gn_3_46320 5.0kb upstream 5.0kb upstream 6775   true Lsat_1_v8_lg_3: 58969633-58976407 Lactuca sativa
Lsat_1_v5_gn_3_46320 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 58969633-58974632 Lactuca sativa
Lsat_1_v5_gn_3_46320 5.0kb downstream 5.0kb downstream 6775   true Lsat_1_v8_lg_3: 58974633-58981407 Lactuca sativa
Lsat_1_v5_gn_3_46320 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 58976408-58981407 Lactuca sativa
Lsat_1_v5_gn_3_46320 10.0kb upstream 10.0kb upstream 11775   true Lsat_1_v8_lg_3: 58964633-58976407 Lactuca sativa
Lsat_1_v5_gn_3_46320 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 58964633-58974632 Lactuca sativa
Lsat_1_v5_gn_3_46320 10.0kb downstream 10.0kb downstream 11775   true Lsat_1_v8_lg_3: 58974633-58986407 Lactuca sativa
Lsat_1_v5_gn_3_46320 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 58976408-58986407 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475509 5263 Asterids View MSA
123750901 5271 Pentapetalae View MSA
122796418 5272 Eudicot View MSA
122046624 5273 Angiosperm View MSA
121350646 5274 Embryophyte View MSA
123428517 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain