Gene : Lsat_1_v5_gn_3_49741 L. sativa V8
Defline:  (1 of 28) K09338 - homeobox-leucine zipper protein (HD-ZIP) Genomic Order:  1612
Name:  ? Lsat_1_v5_gn_3_49741 Secondary Identifier:  ? PAC:38920008
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_49741 0.5kb upstream 0.5kb upstream 2215   true Lsat_1_v8_lg_3: 64838285-64840499 Lactuca sativa
Lsat_1_v5_gn_3_49741 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 64840000-64840499 Lactuca sativa
Lsat_1_v5_gn_3_49741 0.5kb downstream 0.5kb downstream 2215   true Lsat_1_v8_lg_3: 64837785-64839999 Lactuca sativa
Lsat_1_v5_gn_3_49741 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 64837785-64838284 Lactuca sativa
Lsat_1_v5_gn_3_49741 1.0kb upstream 1.0kb upstream 2715   true Lsat_1_v8_lg_3: 64838285-64840999 Lactuca sativa
Lsat_1_v5_gn_3_49741 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 64840000-64840999 Lactuca sativa
Lsat_1_v5_gn_3_49741 1.0kb downstream 1.0kb downstream 2715   true Lsat_1_v8_lg_3: 64837285-64839999 Lactuca sativa
Lsat_1_v5_gn_3_49741 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 64837285-64838284 Lactuca sativa
Lsat_1_v5_gn_3_49741 2.0kb upstream 2.0kb upstream 3715   true Lsat_1_v8_lg_3: 64838285-64841999 Lactuca sativa
Lsat_1_v5_gn_3_49741 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 64840000-64841999 Lactuca sativa
Lsat_1_v5_gn_3_49741 2.0kb downstream 2.0kb downstream 3715   true Lsat_1_v8_lg_3: 64836285-64839999 Lactuca sativa
Lsat_1_v5_gn_3_49741 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 64836285-64838284 Lactuca sativa
Lsat_1_v5_gn_3_49741 5.0kb upstream 5.0kb upstream 6715   true Lsat_1_v8_lg_3: 64838285-64844999 Lactuca sativa
Lsat_1_v5_gn_3_49741 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 64840000-64844999 Lactuca sativa
Lsat_1_v5_gn_3_49741 5.0kb downstream 5.0kb downstream 6715   true Lsat_1_v8_lg_3: 64833285-64839999 Lactuca sativa
Lsat_1_v5_gn_3_49741 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 64833285-64838284 Lactuca sativa
Lsat_1_v5_gn_3_49741 10.0kb upstream 10.0kb upstream 11715   true Lsat_1_v8_lg_3: 64838285-64849999 Lactuca sativa
Lsat_1_v5_gn_3_49741 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 64840000-64849999 Lactuca sativa
Lsat_1_v5_gn_3_49741 10.0kb downstream 10.0kb downstream 11715   true Lsat_1_v8_lg_3: 64828285-64839999 Lactuca sativa
Lsat_1_v5_gn_3_49741 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 64828285-64838284 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480952 5263 Asterids View MSA
123751160 5271 Pentapetalae View MSA
122797641 5272 Eudicot View MSA
122048587 5273 Angiosperm View MSA
121351579 5274 Embryophyte View MSA
123382235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain