Gene : Lsat_1_v5_gn_3_50120 L. sativa V8
Defline:  (1 of 5) PTHR12565//PTHR12565:SF143 - STEROL REGULATORY ELEMENT-BINDING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1585
Name:  ? Lsat_1_v5_gn_3_50120 Secondary Identifier:  ? PAC:38915395
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_50120 0.5kb upstream 0.5kb upstream 2719   true Lsat_1_v8_lg_3: 63499224-63501942 Lactuca sativa
Lsat_1_v5_gn_3_50120 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 63501443-63501942 Lactuca sativa
Lsat_1_v5_gn_3_50120 0.5kb downstream 0.5kb downstream 2719   true Lsat_1_v8_lg_3: 63498724-63501442 Lactuca sativa
Lsat_1_v5_gn_3_50120 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 63498724-63499223 Lactuca sativa
Lsat_1_v5_gn_3_50120 1.0kb upstream 1.0kb upstream 3219   true Lsat_1_v8_lg_3: 63499224-63502442 Lactuca sativa
Lsat_1_v5_gn_3_50120 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 63501443-63502442 Lactuca sativa
Lsat_1_v5_gn_3_50120 1.0kb downstream 1.0kb downstream 3219   true Lsat_1_v8_lg_3: 63498224-63501442 Lactuca sativa
Lsat_1_v5_gn_3_50120 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 63498224-63499223 Lactuca sativa
Lsat_1_v5_gn_3_50120 2.0kb upstream 2.0kb upstream 4219   true Lsat_1_v8_lg_3: 63499224-63503442 Lactuca sativa
Lsat_1_v5_gn_3_50120 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 63501443-63503442 Lactuca sativa
Lsat_1_v5_gn_3_50120 2.0kb downstream 2.0kb downstream 4219   true Lsat_1_v8_lg_3: 63497224-63501442 Lactuca sativa
Lsat_1_v5_gn_3_50120 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 63497224-63499223 Lactuca sativa
Lsat_1_v5_gn_3_50120 5.0kb upstream 5.0kb upstream 7219   true Lsat_1_v8_lg_3: 63499224-63506442 Lactuca sativa
Lsat_1_v5_gn_3_50120 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 63501443-63506442 Lactuca sativa
Lsat_1_v5_gn_3_50120 5.0kb downstream 5.0kb downstream 7219   true Lsat_1_v8_lg_3: 63494224-63501442 Lactuca sativa
Lsat_1_v5_gn_3_50120 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 63494224-63499223 Lactuca sativa
Lsat_1_v5_gn_3_50120 10.0kb upstream 10.0kb upstream 12219   true Lsat_1_v8_lg_3: 63499224-63511442 Lactuca sativa
Lsat_1_v5_gn_3_50120 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 63501443-63511442 Lactuca sativa
Lsat_1_v5_gn_3_50120 10.0kb downstream 10.0kb downstream 12219   true Lsat_1_v8_lg_3: 63489224-63501442 Lactuca sativa
Lsat_1_v5_gn_3_50120 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 63489224-63499223 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466689 5263 Asterids View MSA
123750840 5271 Pentapetalae View MSA
122787869 5272 Eudicot View MSA
122041891 5273 Angiosperm View MSA
121350038 5274 Embryophyte View MSA
123381551 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain