Gene : Lsat_1_v5_gn_3_140981 L. sativa V8
Defline:  (1 of 3) K08506 - syntaxin of plants SYP7 (SYP7) Genomic Order:  3969
Name:  ? Lsat_1_v5_gn_3_140981 Secondary Identifier:  ? PAC:38915567
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_140981 0.5kb upstream 0.5kb upstream 1733   true Lsat_1_v8_lg_3: 257286740-257288472 Lactuca sativa
Lsat_1_v5_gn_3_140981 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 257286740-257287239 Lactuca sativa
Lsat_1_v5_gn_3_140981 0.5kb downstream 0.5kb downstream 1733   true Lsat_1_v8_lg_3: 257287240-257288972 Lactuca sativa
Lsat_1_v5_gn_3_140981 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 257288473-257288972 Lactuca sativa
Lsat_1_v5_gn_3_140981 1.0kb upstream 1.0kb upstream 2233   true Lsat_1_v8_lg_3: 257286240-257288472 Lactuca sativa
Lsat_1_v5_gn_3_140981 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 257286240-257287239 Lactuca sativa
Lsat_1_v5_gn_3_140981 1.0kb downstream 1.0kb downstream 2233   true Lsat_1_v8_lg_3: 257287240-257289472 Lactuca sativa
Lsat_1_v5_gn_3_140981 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 257288473-257289472 Lactuca sativa
Lsat_1_v5_gn_3_140981 2.0kb upstream 2.0kb upstream 3233   true Lsat_1_v8_lg_3: 257285240-257288472 Lactuca sativa
Lsat_1_v5_gn_3_140981 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 257285240-257287239 Lactuca sativa
Lsat_1_v5_gn_3_140981 2.0kb downstream 2.0kb downstream 3233   true Lsat_1_v8_lg_3: 257287240-257290472 Lactuca sativa
Lsat_1_v5_gn_3_140981 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 257288473-257290472 Lactuca sativa
Lsat_1_v5_gn_3_140981 5.0kb upstream 5.0kb upstream 6233   true Lsat_1_v8_lg_3: 257282240-257288472 Lactuca sativa
Lsat_1_v5_gn_3_140981 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 257282240-257287239 Lactuca sativa
Lsat_1_v5_gn_3_140981 5.0kb downstream 5.0kb downstream 6233   true Lsat_1_v8_lg_3: 257287240-257293472 Lactuca sativa
Lsat_1_v5_gn_3_140981 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 257288473-257293472 Lactuca sativa
Lsat_1_v5_gn_3_140981 10.0kb upstream 10.0kb upstream 11233   true Lsat_1_v8_lg_3: 257277240-257288472 Lactuca sativa
Lsat_1_v5_gn_3_140981 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 257277240-257287239 Lactuca sativa
Lsat_1_v5_gn_3_140981 10.0kb downstream 10.0kb downstream 11233   true Lsat_1_v8_lg_3: 257287240-257298472 Lactuca sativa
Lsat_1_v5_gn_3_140981 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 257288473-257298472 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782986 5273 Angiosperm View MSA
121481980 5263 Asterids View MSA
123754224 5271 Pentapetalae View MSA
122775615 5272 Eudicot View MSA
121054482 5274 Embryophyte View MSA
123426500 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain