Gene : Lsat_1_v5_gn_3_16741 L. sativa V8
Defline:  (1 of 2) PTHR10044:SF133 - MND1-INTERACTING PROTEIN 1 Genomic Order:  509
Name:  ? Lsat_1_v5_gn_3_16741 Secondary Identifier:  ? PAC:38919446
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_16741 0.5kb upstream 0.5kb upstream 7249   true Lsat_1_v8_lg_3: 22413743-22420991 Lactuca sativa
Lsat_1_v5_gn_3_16741 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 22420492-22420991 Lactuca sativa
Lsat_1_v5_gn_3_16741 0.5kb downstream 0.5kb downstream 7249   true Lsat_1_v8_lg_3: 22413243-22420491 Lactuca sativa
Lsat_1_v5_gn_3_16741 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 22413243-22413742 Lactuca sativa
Lsat_1_v5_gn_3_16741 1.0kb upstream 1.0kb upstream 7749   true Lsat_1_v8_lg_3: 22413743-22421491 Lactuca sativa
Lsat_1_v5_gn_3_16741 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 22420492-22421491 Lactuca sativa
Lsat_1_v5_gn_3_16741 1.0kb downstream 1.0kb downstream 7749   true Lsat_1_v8_lg_3: 22412743-22420491 Lactuca sativa
Lsat_1_v5_gn_3_16741 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 22412743-22413742 Lactuca sativa
Lsat_1_v5_gn_3_16741 2.0kb upstream 2.0kb upstream 8749   true Lsat_1_v8_lg_3: 22413743-22422491 Lactuca sativa
Lsat_1_v5_gn_3_16741 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 22420492-22422491 Lactuca sativa
Lsat_1_v5_gn_3_16741 2.0kb downstream 2.0kb downstream 8749   true Lsat_1_v8_lg_3: 22411743-22420491 Lactuca sativa
Lsat_1_v5_gn_3_16741 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 22411743-22413742 Lactuca sativa
Lsat_1_v5_gn_3_16741 5.0kb upstream 5.0kb upstream 11749   true Lsat_1_v8_lg_3: 22413743-22425491 Lactuca sativa
Lsat_1_v5_gn_3_16741 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 22420492-22425491 Lactuca sativa
Lsat_1_v5_gn_3_16741 5.0kb downstream 5.0kb downstream 11749   true Lsat_1_v8_lg_3: 22408743-22420491 Lactuca sativa
Lsat_1_v5_gn_3_16741 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 22408743-22413742 Lactuca sativa
Lsat_1_v5_gn_3_16741 10.0kb upstream 10.0kb upstream 16749   true Lsat_1_v8_lg_3: 22413743-22430491 Lactuca sativa
Lsat_1_v5_gn_3_16741 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 22420492-22430491 Lactuca sativa
Lsat_1_v5_gn_3_16741 10.0kb downstream 10.0kb downstream 16749   true Lsat_1_v8_lg_3: 22403743-22420491 Lactuca sativa
Lsat_1_v5_gn_3_16741 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 22403743-22413742 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781291 5273 Angiosperm View MSA
121479675 5263 Asterids View MSA
123749248 5271 Pentapetalae View MSA
122773057 5272 Eudicot View MSA
121349684 5274 Embryophyte View MSA
123427372 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain