Gene : Lsat_1_v5_gn_3_17381 L. sativa V8
Defline:  (1 of 6) PTHR10031//PTHR10031:SF6 - ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIAL // ATP SYNTHASE SUBUNIT C, CHLOROPLASTIC Genomic Order:  518
Name:  ? Lsat_1_v5_gn_3_17381 Secondary Identifier:  ? PAC:38917559
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_3_17381 0.5kb upstream 0.5kb upstream 725   true Lsat_1_v8_lg_3: 23027430-23028154 Lactuca sativa
Lsat_1_v5_gn_3_17381 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_3: 23027430-23027929 Lactuca sativa
Lsat_1_v5_gn_3_17381 0.5kb downstream 0.5kb downstream 725   true Lsat_1_v8_lg_3: 23027930-23028654 Lactuca sativa
Lsat_1_v5_gn_3_17381 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_3: 23028155-23028654 Lactuca sativa
Lsat_1_v5_gn_3_17381 1.0kb upstream 1.0kb upstream 1225   true Lsat_1_v8_lg_3: 23026930-23028154 Lactuca sativa
Lsat_1_v5_gn_3_17381 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_3: 23026930-23027929 Lactuca sativa
Lsat_1_v5_gn_3_17381 1.0kb downstream 1.0kb downstream 1225   true Lsat_1_v8_lg_3: 23027930-23029154 Lactuca sativa
Lsat_1_v5_gn_3_17381 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_3: 23028155-23029154 Lactuca sativa
Lsat_1_v5_gn_3_17381 2.0kb upstream 2.0kb upstream 2225   true Lsat_1_v8_lg_3: 23025930-23028154 Lactuca sativa
Lsat_1_v5_gn_3_17381 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_3: 23025930-23027929 Lactuca sativa
Lsat_1_v5_gn_3_17381 2.0kb downstream 2.0kb downstream 2225   true Lsat_1_v8_lg_3: 23027930-23030154 Lactuca sativa
Lsat_1_v5_gn_3_17381 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_3: 23028155-23030154 Lactuca sativa
Lsat_1_v5_gn_3_17381 5.0kb upstream 5.0kb upstream 5225   true Lsat_1_v8_lg_3: 23022930-23028154 Lactuca sativa
Lsat_1_v5_gn_3_17381 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_3: 23022930-23027929 Lactuca sativa
Lsat_1_v5_gn_3_17381 5.0kb downstream 5.0kb downstream 5225   true Lsat_1_v8_lg_3: 23027930-23033154 Lactuca sativa
Lsat_1_v5_gn_3_17381 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_3: 23028155-23033154 Lactuca sativa
Lsat_1_v5_gn_3_17381 10.0kb upstream 10.0kb upstream 10225   true Lsat_1_v8_lg_3: 23017930-23028154 Lactuca sativa
Lsat_1_v5_gn_3_17381 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_3: 23017930-23027929 Lactuca sativa
Lsat_1_v5_gn_3_17381 10.0kb downstream 10.0kb downstream 10225   true Lsat_1_v8_lg_3: 23027930-23038154 Lactuca sativa
Lsat_1_v5_gn_3_17381 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_3: 23028155-23038154 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028907 5273 Angiosperm View MSA
121481630 5263 Asterids View MSA
123751411 5271 Pentapetalae View MSA
122797516 5272 Eudicot View MSA
121351324 5274 Embryophyte View MSA
123428045 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain